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Julien Cohen-AdadDepartment of Electrical Engineering
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Al-Shawwa, A., Ost, K., Anderson, D., Cho, N., Evaniew, N., Jacobs, W. B., Martin, A. R., Gaekwad, R., Tripathy, S., Bouchard, J., Casha, S., Cho, R., duPlessis, S., Lewkonia, P., Nicholls, F., Salo, P. T., Soroceanu, A., Swamy, G., Thomas, K. C., ... Cadotte, D. W. (2024). Advanced MRI metrics improve the prediction of baseline disease severity for individuals with degenerative cervical myelopathy. The Spine Journal, 10 pages. External link
Aigner, C. S., Sánchez Alarcon, M. F., D'Astous, A., Alonso Ortiz, E., Cohen-Adad, J., & Schmitter, S. (2024). Calibration-free parallel transmission of the cervical, thoracic, and lumbar spinal cord at 7T. Magnetic Resonance in Medicine, 30137 (15 pages). External link
Alonso Ortiz, E., Papp, D., D'Astous, A., & Cohen-Adad, J. (2023). Dynamic shimming in the cervical spinal cord for multi-echo gradient-echo imaging at 3 T. Neuroimage: Reports, 3(1), 100150. External link
Absinta, M., Bhagavatheeshwaran, G., Cohen-Adad, J., Flanagan, E., Henry, R., Keegan, M., Klawiter, E., Kolind, S., Krieger, S., Laule, C., Lincoln, J., Messina, S., Oh, J., Papinutto, N., Smith, S., & Traboulsee, A. (2023, October). Spinal Cord Evaluation in MS: Clinical and Radiological Associations, Present and Future. NAIMS Spinal Cord Interest Group [Poster]. 9th Joint ECTRIMS-ACTRIMS meeting (MSMilan 2023), Milan, Italy (1 page). Published in Multiple Sclerosis Journal, 29(3S). External link
Azad, R., Heidari, M., Cohen-Adad, J., Adeli, E., & Merhof, D. (2022, September). Intervertebral Disc Labeling with Learning Shape Information, a Look once Approach [Paper]. 5th International Workshop on Predictive Intelligence in Medicine (PRIME 2022). External link
Azad, R., Rouhier, L., & Cohen-Adad, J. (2021, September). Stacked Hourglass Network with a Multi-level Attention Mechanism: Where to Look for Intervertebral Disc Labeling [Paper]. 12th International Workshop on Machine Learning in Medical Imaging (MLMI 2021). External link
Asgari Taghanaki, S., Abhishek, K., Cohen, J. P., Cohen-Adad, J., & Hamarneh, G. (2020). Deep semantic segmentation of natural and medical images: a review. Artificial Intelligence Review, 54(1), 137-178. External link
Alonso Ortiz, E., Gros, C., Foias, A., Abramovic, M., Ameitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Buchel, C., Budde, M., Callot, V., De Leener, B., Descoteaux, M., De Sousa, P. L., Dostal, M., Doyon, J., Dvorak, A., ... Cohen-Adad, J. (2020, August). Quantitative MRI of the spinal cord : reproducibility and normative values across 40 sites [Paper]. ISMRM & SMRT annual Meeting & Exhibition (ISMRM 2020). External link
Alonso Ortiz, E., Tous, C., Topfer, R., & Cohen-Adad, J. (2020, August). Real-time z-shimming for magnetic resonance imaging of the spinal cord [Paper]. ISMRM & SMRT annual Meeting & Exhibition (ISMRM 2020). External link
Andica, C., Hagiwara, A., Kamagata, K., Yokoyama, K., Shimoji, K., Saito, A., Takenaka, Y., Nakazawa, M., Hori, M., Cohen-Adad, J., Takemura, M. Y., Hattori, N., & Aoki, S. (2019). Gray matter alterations in early and late relapsing-remitting multiple sclerosis evaluated with synthetic quantitative magnetic resonance imaging. Scientific Reports, 9(1), 8147-8156. Available
AskariHemmat Hossein, M., Savaria, Y., Jean-Pierre, D., Honari, S., Perone, C., Rouhier, L., & Cohen-Adad, J. (2019, October). Fixed-point u-net quantization for medical image segmentation [Paper]. 22nd International Conference on Medical Image Computing & Computer Assisted Intervention (MICCAI 2019), Shenzhen, China. Unavailable
AskariHemmat, M.H., Honari, S., Rouhier, L., Perone, C. S., Cohen-Adad, J., Savaria, Y., & David, J. P. (2019, October). U-net fixed-point quantization for medical image segmentation [Paper]. 1st International Workshop on Hardware Aware Learning for Medical Imaging and Computer Assisted Intervention (HAL-MICCAI 2019), Shenzhen, China. External link
Alley, S., Gilbert, G., Wheeler-Kingshott, C. A. M. G., Samson, R. S., Grussu, F., Martin, A., Bannier, É., Callot, V., Smith, S. A., Xu, J., Dewey, B., Weber, K. A., Parrish, T., McLauren, D., Barker, G. J., Papinutto, N., Seif, M., Freund, P., Barry, R. L., ... Cohen-Adad, J. (2018, June). Consensus acquisition protocol for quantitative MRI of the cervical spinal cord at 3T [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Albrecht, D. S., Ahmed, S. U., Kettner, N. W., Borra, R. J. H., Cohen-Adad, J., Deng, H., Houle, T. T., Opalacz, A., Roth, S. A., Melo, M. F. V., Chen, L., Mao, J., Hooker, J. M., Loggia, M. L., & Zhang, Y. (2018). Neuroinflammation of the spinal cord and nerve roots in chronic radicular pain patients. Pain, 159(5), 968-977. External link
Aleem, I., Xu, Y., Rampersaud, Y. R., Pahuta, M., St-Pierre, G. H., Crawford, E. W., Zarrabian, M., Yang, M., Scheer, J. K., Lou, E., Malleck, S., Soroceanu, A., White, B., Holtz, K. A., Fallah, N., Noonan, V. K., Finkelstein, J., Rivers, C. S., Tee, J., ... Badley, E. M. (2016, February). Canadian Spine Society1.01: Do lumbar decompression and fusion patients recall their preoperative status? Recall bias in patient-reported outcomes1.02: Trends and costs of lumbar fusion and disc replacement surgeries in Ontario: a population-based study1.03: Ontario's Inter-professional Spine Assessment and Education Clinics (ISAEC): patient, provider and system impact of an integrated model of care for the management of LBP1.04: Validation of the self-administered online assessment of … [Paper]. 16th Annual Scientific Conference - Canadian Spine Society, The Fairmont Château Whistler, Whistler, British Columbia. Published in Canadian Journal of Surgery, 59(3 Suppl 2). External link
Atassi, N., Ratai, E.-M., Cohen-Adad, J., Lawson, R., Dheel, C., Keil, B., Triantafyllou, C., & Cudkowicz, M. (2012, February). Mechanism-based neuroimaging using 7-T MRI in amyotrophic lateral sclerosis (ALS) [Paper]. 25th Annual Massachusetts ADRC, Boston, MA. Unavailable
Boschet, A., Collin, A., Katoch, N., & Cohen-Adad, J. (2024, October). Unpaired Modality Translation for Pseudo Labeling of Histology Images [Paper]. 4th Workshop on Deep Generative Models for Medical Image Computing and Computer Assisted Intervention (DGM4MICCAI 2024), Marrakesh, Morocco. External link
Boudreau, M., Karakuzu, A., Boré, A., Pinsard, B., Zelenkovski, K., Alonso Ortiz, E., Boyle, J., Bellec, L., & Cohen-Adad, J. (2024). Longitudinal reproducibility of brain and spinal cord quantitative MRI biomarkers. Imaging Neuroscience. External link
Bagheri, H., Friedman, H., Hadwen, A., Jarweh, C., Cooper, E., Oprea, L., Guerrier, C., Khadra, A., Collin, A., Cohen-Adad, J., Young, A., Victoriano, G. M., Swire, M., Jarjour, A., Bechler, M. E., Pryce, R. S., Chaurand, P., Cougnaud, L., Vuckovic, D., ... Peterson, A. C. (2024). Myelin basic protein mRNA levels affect myelin sheath dimensions, architecture, plasticity, and density of resident glial cells. Glia, 24589 (22 pages). External link
Boudreau, M., Karakuzu, A., Cohen-Adad, J., Bozkurt, E., Carr, M., Castellaro, M., Concha, L., Doneva, M., Dual, S. A., Ensworth, A., Foias, A., Fortier, V., Gabr, R. E., Gilbert, G., Glide-Hurst, C. K., Grech-Sollars, M., Hu, S., Jalnefjord, O., Jovicich, J., ... Stikov, N. (2024). Paper is not enough: Crowdsourcing the T₁ mapping common ground via the ISMRM reproducibility challenge [Dataset]. External link
Boudreau, M., Karakuzu, A., Cohen-Adad, J., Bozkurt, E., Carr, M., Castellaro, M., Concha, L., Doneva, M., Dual, S. A., Ensworth, A., Foias, A., Fortier, V., Gabr, R. E., Gilbert, G., Glide-Hurst, C. K., Grech-Sollars, M., Hu, S., Jalnefjord, O., Jovicich, J., ... ISMRM Quantitative MR Study Group, T. (2024). Repeat it without me: Crowdsourcing the T1 mapping common ground via the ISMRM reproducibility challenge. Magnetic Resonance in Medicine, 30111 (13 pages). External link
Beal, E., & Cohen-Adad, J. (2023). Contrast-agnostic deep learning–based registration pipeline: Validation in spinal cord multimodal MRI data. Aperture Neuro, 3(2023), 1-21. External link
Bédard, S., El Baz, A., Macar, U., Bouchard, L.-F., & Cohen-Adad, J. (2023, July). Contrast-agnostic segmentation of the spinal cord : validation in a multi-center cohort [Poster]. OHBM 2023, Montreal, Qc, Canada. External link
Bédard, S., El Baz, A., Macar, U., & Cohen-Adad, J. (2023, June). Contrast-agnostic segmentation of the spinal cord using deep learning [Presentation]. In ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Boudreau, M., Karakuzu, A., Boré, A., Zelenkovski, K., Pinsard, B., Alonso Ortiz, E., Boyle, J., Bellec, P., & Cohen-Adad, J. (2023, June). Longitudinal stability of brain and spinal cord quantitative MRI measures [Presentation]. In ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Boudreau, M., Karakuzu, A., Boré, A., Pinsard, B., Zelenkovski, K., Alonso-Ortiz, E., Boyle, J., Bellec, P., & Cohen-Adad, J. (2023). Longitudinal stability of brain and spinal cord quantitative MRI measures [Dataset]. External link
Boudreau, M., Karakuzu, A., Boré, A., Zelenkovski, K., Pinsard, B., Alonso Ortiz, E., Boyle, J., Bellec, P., & Cohen-Adad, J. (2023, June). Longitudinal stability of brain and spinal cord structural quantitative MRI measures [Poster]. ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Blostein, N., Banerjee, R., Bédard, S., Shahrampour, S., De Leener, B., Mohamed, F. B., Middleton, D., Krisa, L., & Cohen-Adad, J. (2023, May). Multimodal pediatric spinal cord template [Paper]. QBIN Scientific Day 2023, Laval, Qc, Canada. External link
Boudreau, M., Karakuzu, A., Cohen-Adad, J., Carr, M., Doneva, M., Dual, S. A., Ennis, D. B., Ensworth, A., Foias, A., Fortier, V., Gilbert, G., Grech-Sollars, M., Holloway, L., Hu, S., Jalnefjord, O., Koken, P., Kolokotronis, A., Kukran, S., Lee, N., ... Stikov, N. (2023, June). Phantom results of the ISMRM Joint RRSG-qMRSG reproducibility challenge on T1 mapping [Paper]. ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Bédard, S., Bouthillier, M., & Cohen-Adad, J. (2023). Pontomedullary junction as a reference for spinal cord cross-sectional area: validation across neck positions. Scientific Reports, 13(1), 10 pages. Available
Boudreau, M., Karakuzu, A., Cohen-Adad, J., Bozkurt, E., Carr, M., Castellaro, M., Concha, L., Doneva, M., Dual, S., Ensworth, A., Foias, A., Fortier, V., Gabr, R. E., Gilbert, G., Glide-Hurst, C. K., Grech-Sollars, M., Hu, S., Jalnefjord, O., Jovicich, J., ... Stikov, N. (2023). Results of the ISMRM 2020 joint Reproducible Research & Quantitative MR study groups reproducibility challenge on phantom and human brain T₁ mapping [Dataset]. External link
Blostein, N., Karakuzu, A., Samson, P., Stikov, N., & Cohen-Adad, J. (2023, July). Vendor-neutral automated acquisition workflow for spinal cord MRI [Poster]. OHBM 2023, Montreal, Qc, Canada. External link
Bédard, S., & Cohen-Adad, J. (2022). Automatic measure and normalization of spinal cord cross-sectional area using the pontomedullary junction. Frontiers in Neuroimaging, 1, 1031253 (15 pages). Available
Badji, A., Cohen-Adad, J., & Girouard, H. (2022). Relationship between arterial stiffness index, pulse pressure, and magnetic resonance imaging markers of white matter integrity: A UK biobank study. Frontiers in Aging Neuroscience, 14, 856782 (11 pages). Available
Bourget, M.-H., Kamentsky, L., Ghosh, S. S., Mazzamuto, G., Lazari, A., Markiewicz, C. J., Oostenveld, R., Niso, G., Halchenko, Y. O., Lipp, I., Takerkart, S., Toussaint, P.-J., Khan, A. R., Nilsonne, G., Castelli, F. M., & Cohen-Adad, J. (2022). Microscopy-BIDS: an extension to the brain imaging data structure for microscopy data. Frontiers in Neuroscience, 16, 8 pages. Available
Bautin, P., & Cohen-Adad, J. (2021). Minimum detectable spinal cord atrophy with automatic segmentation: Investigations using an open-access dataset of healthy participants. Neuroimage-Clinical, 32, 102849 (10 pages). External link
Boshkovski, T., Cohen-Adad, J., Misic, B., Arnulf, I., Corvol, J.-C., Vidailhet, M., Lehéricy, S., Stikov, N., & Mancini, M. (2021). The Myelin-Weighted Connectome in Parkinson's Disease. Movement Disorders, 37(4), 724-733. External link
Barletta, V., Herranz, E., Treaba, C. A., Mehndiratta, A., Ouellette, R., Mangeat, G., Granberg, T., Sloane, J. A., Klawiter, E., Cohen-Adad, J., & Mainero, C. (2021). Quantitative 7-Tesla Imaging of Cortical Myelin Changes in Early Multiple Sclerosis. Frontiers in Neurology, 12, 714820 (10 pages). External link
Boshkovski, T., Kocarev, L., Cohen-Adad, J., Mišić, B., Lehéricy, S., Stikov, N., & Mancini, M. (2021). The R1-weighted connectome: complementing brain networks with a myelin-sensitive measure. Network Neuroscience, 5(2), 358-372. External link
Badji, A., Adrián, N. C., Karakuzu, A., Duval, T., Desjardins-Crépeau, L., Parizet, M., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N., Cohen-Adad, J., & Girouard, H. (2020). Arterial stiffness cut-off value and white matter integrity in the elderly. Neuroimage-Clinical, 26, 102007 (11 pages). External link
Boyle, J. A., Pinsard, B., Boukhdhir, A., Belleville, S., Brambatti, S., Chen, J., Cohen-Adad, J., Cyr, A., Fuente, A., Rainville, P., & Bellec, P. (2020, June). The courtois project on neuronal modelling - first data release [Paper]. 26th OHBM annual meeting. External link
Badj, A., de la Colina, A. N., Boshkovski, T., Sabra, D., Karakuzu, A., Robitaille-Grou, M.-C., Gros, C., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N., Gauthier, C. J., Cohen-Adad, J., & Girouard, H. (2020). A Cross-Sectional Study on the Impact of Arterial Stiffness on the Corpus Callosum, a Key White Matter Tract Implicated in Alzheimer's Disease. Journal of Alzheimers Disease, 77(2), 591-605. External link
Bagnato, F., Gauthier, S. A., Laule, C., Moore, G. R. W., Bove, R., Cai, Z., Cohen-Adad, J., Harrison, D. M., Klawiter, E. C., Morrow, S. A., Oz, G., Rooney, W. D., Smith, S. A., Calabresi, P. A., Henry, R. G., Oh, J., Ontaneda, D., Pelletier, D., Reich, D. S., ... Sicotte, N. L. (2020). Imaging Mechanisms of Disease Progression in Multiple Sclerosis: Beyond Brain Atrophy. Journal of Neuroimaging, 30(3), 251-266. External link
Badji, A., De la Colina, A. N., Karakuzu, A., Duval, T., Desjardins-Crépeau, L., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N., Cohen-Adad, J., & Girouard, H. (2019, January). Approches en imagerie par résonance magnétique pour l'étude de l'impact de la rigidité artérielle sur la matière blanche du cerveau chez les personnes âgées [Paper]. 27e Congrès scientifique annuel de la Société québécoise d'hypertension artérielle, Québec, Qc. Unavailable
Badji, A., Sabra, D., Bherer, L., Cohen-Adad, J., Girouard, H., & Gauthier, C. J. (2019). Arterial stiffness and brain integrity: A review of MRI findings. Ageing Research Reviews, 53, Unsp 10090 (11 pages). External link
Badji, A., Noriega de la Colina, A., Karakuzu, A., Duval, T., Desjardins-Crépeau, L., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N., Girouard, H., & Cohen-Adad, J. (2019, May). Arterial stiffness and white matter integrity in the elderly : a diffusion tensor and magnetization transfer imaging study [Poster]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
Badji, A., de la Colina, A. N., Karakuzu, A., Duval, T., Desjardins-Crepeau, L., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N., Girouard, H., & Cohen-Adad, J. (2019). Arterial stiffness and white matter integrity in the elderly: a diffusion tensor and magnetization transfer imaging study. NeuroImage, 186, 577-585. External link
Badji, A., de la Colina, A. N., Sabra, D., Karakuzu, A., Bherer, L., Lamarre-Cliche, M., Stikov, N., Gauthier, C., Cohen-Adad, J., & Girouard, H. (2019, July). Arterial stiffness, cerebral blood flow and white matter integrity in the elderly: an arterial spin labelling and Neurite orientation dispersion and density study [Abstract]. 29th International Symposium on Cerebral Blood Flow, Metabolism and Function / 14th International Conference on Quantification of Brain Function with PET (BRAIN 2019 and BRAIN Pet 2019), Yokohama, JAPAN. Published in Journal of Cerebral Blood Flow and Metabolism, 39(1_suppl). External link
Barletta, V., Herranz, E., Treaba, A., Mehndiratta, A., Ouellette, R., Mangeat, G., Sloane, J., Mercaldo, N., Cohen-Adad, J., & Mainero, C. (2019, September). In vivo characterization of cortical lesion demyelination and remyelination in early multiple sclerosis by quantitative 7 Tesla MRI [Abstract]. 35th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS 2019) and 24th Annual Conference of Rehabilitation in MS, Stockholm, Sweden. Published in Multiple Sclerosis Journal, 25(S2). External link
Boshkovski, T., Badji, A., Janic, P., Kocarev, L., Cohen-Adad, J., Giorgio, A., De Stefano, N., Misic, B., & Stikov, N. (2019, May). The myelin-weighted connectome : a new look at multiple sclerosis [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
Badji, A., de la Colina, A. N., Sabra, D., Karakuzu, A., Bherer, L., Lamarre-Cliche, M., Stikov, N., Gauthier, C., Cohen-Adad, J., & Girouard, H. (2019, July). The relationship between cognitive function, cortical blood flow and sub-cortical white-matter health in the elderly [Abstract]. 29th International Symposium on Cerebral Blood Flow, Metabolism and Function / 14th International Conference on Quantification of Brain Function with PET (BRAIN 2019 and BRAIN Pet 2019), Yokohama, JAPAN. Published in Journal of Cerebral Blood Flow and Metabolism, 39(1_suppl). External link
Badji, A., Mangeat, G., Ouellette, R., Treaba, C. A., Granberg, T., Herranz, E., Louapre, C., Stikov, N., Sloane, J., Bellec, P., Mainero, C., & Cohen-Adad, J. (2017, April). Changes in structural network connectivity in early-stage multiple sclerosis are associated with cortical demyelination [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Benhamou, M., Fonov, V., Taso, M., Le Troter, A., Sdika, M., Collins, L., Callot, V., & Cohen-Adad, J. (2014, May). Atlas of white-matter tracts in the human spinal cord [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
Bilgic, B., Setsompop, K., Cohen-Adad, J., Yendiki, A., Wald, L. L., & Adalsteinsson, E. (2012, October). Accelerated diffusion spectrum imaging with compressed sensing using adaptive dictionaries [Paper]. 15th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2012), Nice, France. Published in Magnetic Resonance in Medicine, 68(6). External link
Bhat, H., Cohen-Adad, J., Tisdall, M. D., Van der Kouwe, A., & Heberlein, K. (2012, June). Demonstration of a novel prospective motion correction technique for diffusion neuroimaging [Paper]. 18th Annual Meeting of the Organization for Human Brain Mapping (OHBM), Beijing, Chine. Unavailable
Brieu, N., Beaumont, E., Dubeau, S., Cohen-Adad, J., & Lesage, F. (2010). Characterization of the hemodynamic response in the rat lumbar spinal cord using intrinsic optical imaging and laser speckle. Journal of Neuroscience Methods, 191(2), 151-157. External link
Brooks, J. C. W., Cohen-Adad, J., Gauthier, C., Hoge, R. D., & Rossignol, S. (2009, June). Studying the sensorimotor pathways : brain, brainstem, spinal cord imaging [Paper]. 15th OHBM annual meeting, San Francisco, California. Unavailable
Combes, B. F., Kalva, S. K., Benveniste, P.-L., Tournant, A., Law, M. H., Newton, J., Krüger, M., Weber, R. Z., Dias, I., Noain, D., Dean-Ben, X. L., Konietzko, U., Baumann, C. R., Gillberg, P.-G., Hock, C., Nitsch, R. M., Cohen-Adad, J., Razansky, D., & Ni, R. (2024). Spiral volumetric optoacoustic tomography of reduced oxygen saturation in the spinal cord of M83 mouse model of Parkinson's disease. European Journal of Nuclear Medicine and Molecular Imaging, 17 pages. External link
Cohen-Adad, J., Alonso Ortiz, E., Alley, S., Lagana, M. M., Baglio, F., Vannesjo, S. J., Karbasforoushan, H., Seif, M., Seifert, A. C., Xu, J., Kim, J.-W., Labounek, R., Vojtiek, L., Dostal, M., Valoek, J., Samson, R. S., Grussu, F., Battiston, M., Wheeler-Kingshott, C. A. M. G., ... Prados, F. (2022). Comparison of multicenter MRI protocols for visualizing the spinal cord gray matter. Magnetic Resonance in Medicine, 88(2), 849-859. External link
Cohen-Adad, J. (2022). ivado-medical-imaging [Dataset]. External link
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Generic acquisition protocol for quantitative MRI of the spinal cord. Nature Protocols, 16(10), 4611-4632. Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A. J.E., De Leener, B., Descoteaux, M., Sousa, P. L. , Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 251 (2 pages). Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021). Scientific Data, 8(1), 242 (1 page). Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 219 (17 pages). Available
Cohen-Adad, J. (2021). Quantitative magnetic resonance imaging of spinal cord microstructure in adults with cerebral palsy. Developmental Medicine & Child Neurology, 63(8), 896-896. External link
Cohen-Adad, J. (2020). Spine Generic Public Database (Single Subject) [Dataset]. External link
Chougar, L., Hagiwara, A., Takano, N., Andica, C., Cohen-Adad, J., Warntjes, M., Maekawa, T., Hori, M., Koshino, S., Nakazawa, M., Abe, O., & Aoki, S. (2020). Signal Intensity within Cerebral Venous Sinuses on Synthetic MRI. Magnetic Resonance in Medical Sciences, 19(1), 56-63. External link
Chen, J., & Cohen-Adad, J. (2019). Functional magnetic resonance imaging. In Encyclopedia of biomedical engineering (pp. 533-544). External link
Calabrese, E., Adil, S. M., Cofer, G., Perone, C. S., Cohen-Adad, J., Lad, S. P., & Johnson, G. A. (2018). Postmortem diffusion MRI of the entire human spinal cord at microscopic resolution. NeuroImage: Clinical, 18, 963-971. Available
Cohen-Adad, J. (2016, August). Microstructural imaging in the spinal cord and validation strategies [Paper]. Workshop on Toward a Super-BigBrain - Promise and Pitfalls of Microstructural Imaging, Montréal, QC, Canada. Published in Neuroimage, 182. External link
Cohen-Adad, J., & Lopez Rios, N. (2018). MRI coil apparatus and method. (Patent Application no. WO2018195654). External link
Campbell, J. S. W., Leppert, I. R., Narayanan, S., Boudreau, M., Duval, T., Cohen-Adad, J., Pike, G. B., & Stikov, N. (2016, August). Promise and pitfalls of g-ratio estimation with MRI [Paper]. Workshop on Toward a Super-BigBrain - Promise and Pitfalls of Microstructural Imaging, Montréal, Canada. Published in Neuroimage, 182. External link
Cadotte, D. W., Akbar, M. A., Fehlings, M. G., Stroman, P. W., & Cohen-Adad, J. (2018). What Has Been Learned from Magnetic Resonance Imaging Examination of the Injured Human Spinal Cord: A Canadian Perspective. Journal of Neurotrauma, 35(16), 1942-1957. External link
Cabana, J.-F., Gilbert, G., Stikov, N., Cohen-Adad, J., Létourneau-Guillon, L., & Nguyen, D. (2017, April). Exploring complementarity in multi-modal imaging of cortex microstructure: a diffusion and relaxometry study [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Cohen-Adad, J. (2017). Functional Magnetic Resonance Imaging of the Spinal Cord: Current Status and Future Developments. Seminars in Ultrasound CT and MRI, 38(2), 176-186. External link
Craddock, R. C., Margulies, D. S., Bellec, P., Nichols, B. N., Alcauter, S., Barrios, F. A., Burnod, Y., Cannistraci, C. J., Cohen-Adad, J., De Leener, B., Dery, S., Downar, J., Dunlop, K., Franco, A. R., Froehlich, C. S., Gerber, A. J., Ghosh, S. S., Grabowski, T. J., Hill, S., ... Xu, T. (2016). Brainhack: a collaborative workshop for the open neuroscience community. GigaScience, 5(1), 1-8. Available
Campbell, J. S. W., Leppert, I. R., Boudreau, M., Narayanan, S., Cohen-Adad, J., Pike, G. B., & Stikov, N. (2016, May). Mapping the myelin g-ratio: promises and pitfalls. [Paper]. 24th Annual Meeting of ISMRM, Singapore. External link
Cabana, J.-F., Gu, Y., Boudreau, M., Levesque, I. R., Atchia, Y., Sled, J. G., Narayanan, S., Arnold, D. L., Pike, B. G., Cohen-Adad, J., Duval, T., Vuong, M.-T., & Stikov, N. (2016, May). Quantitative Magnetization Transfer Imaging Made Easy with qMTLab: Software for Data Simulation, Analysis and Visualisation. [Paper]. 24th Annual Meeting of ISMRM, Singapore. External link
Cadotte, D. W., Cadotte, A., Cohen-Adad, J., Fleet, D., Livne, M., Wilson, J. R., Mikulis, D., Nugaeva, N., & Fehlings, M. G. (2015). Characterizing the Location of Spinal and Vertebral Levels in the Human Cervical Spinal Cord. American Journal of Neuroradiology, 36(4), 803-810. External link
Cohen-Adad, J., Martin, A. R., & Fehlings, M. G. (2015). Magnetic resonance imaging of the injured spinal cord: the present and the future. In Vialle, L. R., Riew, K. D., & Ito, M. (eds.), AOSpine Masters Series (pp. 39-56). External link
Cabana, J.-F., Ye, G., Boudreau, M., Levesque, I. R., Atchia, Y., Sled, J. G., Narayanan, S., Arnold, D. L., Pike, G. B., Cohen-Adad, J., Duval, T., Manh-Tung, V., & Stikov, N. (2015). Quantitative magnetization transfer imaging made easy with qMTLab: software for data simulation, analysis, and visualization. Concepts in Magnetic Resonance, Part A (Bridging Education and Research), 44A(5), 263-277. External link
Cohen-Adad, J., Levy, S., & Avants, B. (2015, May). Slice-by-slice regularized registration for spinal cord MRI: SliceReg [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
Cadotte, A., Cadotte, D. W., Livne, M., Cohen-Adad, J., Fleet, D., Mikulis, D., & Fehlings, M. G. (2015). Spinal Cord Segmentation by One Dimensional Normalized Template Matching: A Novel, Quantitative Technique to Analyze Advanced Magnetic Resonance Imaging Data. PLOS One, 10(10). Available
Cohen-Adad, J., & Wald, L. L. (2014). Array Coils. In Cohen-Adad, J., & Wheeler-Kingshott, C. A. M. G. (eds.), Quantitative MRI of the Spinal Cord (pp. 59-67). External link
Cohen-Adad, J., Triantafyllou, C., & Wald, L. L. (2014, May). Effect of spatial smoothing and cardiac gating on physiological noise in spinal cord fMRI [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
Cohen-Adad, J., Samson, R. S., Schneider, T., Smith, A. K., Benhamou, M., Leveque, G., Smith, S. A., & Wheeler-Kingshott, C. A. M. G. (2014, May). Multisite DTI of the spinal cord with integrated template and white matter atlas processing pipeline [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
Cohen-Adad, J., & Wheeler-Kingshott, C. A. M. G. (eds.) (2014). Quantitative MRI of the spinal cord. External link
Cohen-Adad, J., Martinez, M., Delivet-Mongrain, H., & Rossignol, S. (2014). Recovery of locomotion after partial spinal cord lesions in cats: assessment using behavioral, electrophysiological and imaging techniques. Acta Neurobiologiae Experimentalis, 74(2), 142-157. Available
Cadotte, D. W., Cadotte, A., Cohen-Adad, J., Fleet, D., Livne, M., Mikulis, D., & Fehlings, M. G. (2014, May). Resolving the anatomic variability of the human cervical spinal cord : a solution to facilitate advanced neural imaging [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
Cohen-Adad, J., De Leener, B., Benhamou, M., Cadotte, D., Fleet, D., Cadotte, A., Fehlings, M. G., Pelletier Paquette, J. F., Thong, W., Taso, M., Collins, D. L., Callot, V., & Fonov, V. (2014, June). Spinal cord toolbox : an open-source framework for processing spinal cord MRI data [Paper]. 20th Annual Meeting of OHBM, Hamburg, Germany. External link
Cohen-Adad, J. (2014). What can we learn from T2* maps of the cortex? NeuroImage, 93, Part 2, 189-200. External link
Cohen-Adad, J., Zhao, W., Oaklander, A. L., Cudkowicz, M., Atassi, N., & Wald, L. L. (2013, April). 7T MRI of the pathological spinal cord [Paper]. ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. External link
Cohen-Adad, J., Zhao, W., Keil, B., Ratai, E.-M., Lawson, R., Dheel, C., Wald, L. L., Rosen, B. R., Cudkowicz, M., & Atassi, N. (2013). 7T MRI of the spinal cord can detect corticospinal tract abnormality in ALS. Muscle Nerve, 47(5), 760-762. External link
Cohen-Adad, J., El Mendili, M.-M., Morizot-Koutlidis, R., Lehéricy, S., Meininger, V., Blancho, S., Rossignol, S., Benali, H., & Pradat, P.-F. (2013). Involvement of spinal sensory pathway in Als and specificity of cord atrophy to lower motor neuron degeneration. Amyotrophic Lateral Sclerosis and Frontotemporal Degeneration, 14(1), 30-38. External link
Cauley, S. F., Abuhashem, O. A., Bilgic, B., Chatnuntawech, I., Cohen-Adad, J., Setsompop, K., Adalsteinsson, E., & Wald, L. L. (2013, April). Low-rank basis smoothing for the denoising of diffusion weighted Images [Paper]. ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. External link
Cadotte, D. W., Cohen-Adad, J., & Fehlings, M. G. (2013). Visualizing integrative functioning in the human brainstem and spinal cord with spinal fMRI. Clinical Neurosurgery, 60(102-109), 102-109. External link
Cohen-Adad, J., Zhao, W., Wadd, L. L., & Oaklander, A. L. (2012). 7T MRI of spinal cord injury. Neurology, 79(22), 2217-2217. External link
Cohen-Adad, J. (2012, September). 7T MRI of the human spinal cord. [Paper]. 51th Annual Scientific meeting of the International Spinal Cord Society (ISCOS), London. Unavailable
Cohen-Adad, J., Polimeni, J. R., Rosen, B. R., Mainero, C., & Wald, L. L. (2012, May). BO-orientation dependence can characterize cortical and sub-cortical fibers in vivo at 7T [Paper]. 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. External link
Cohen-Adad, J., Buchbinder, B., & Oaklander, A. L. (2012). Cervical spinal cord injection of epidural corticosteroids: Comprehensive longitudinal study including multiparametric MRI. Pain, 153(11), 2292-2299. External link
Cohen-Adad, J. (2012). High-Resolution DWI in brain and spinal cord with syngo RESOLVE. MAGNETOM Flash The Magazine of MRI, 2, 16-23. External link
Cohen-Adad, J., Tisdall, M. D., Kimmlingen, R., Eberlein, E., Witzel, T., Hoecht, P., Keil, B., Nistler, J., Lehne, D., Heberlein, K., McNab, J. A., Thein, H., Schmitt, F., Rosen, B. R., Wedeen, V. J., & Wald, L. L. (2012, May). Improved Q-Ball imaging using a 300 mT/m human gradient [Paper]. 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. External link
Cohen-Adad, J., Zhao, W., Wald, L. L., Buchbinder, B., & Oaklander, A. L. (2012, October). Preliminary clinical utility of advanced spinal-cord MRI [Paper]. 2012 Annual Meeting of the American Neurological Association, Boston, MA. Unavailable
Cohen-Adad, J., Polimeni, J. R., Helmer, K. G., Benner, T., McNab, J. A., Wald, L. L., Rosen, B., & Mainero, C. (2012). T2* mapping and BO orientation-dependence at 7T reveal cyto- and myeloarchitecture organization of the human cortex. NeuroImage, 60(2), 1006-1014. External link
Cohen-Adad, J., Mareyam, A., Keil, B., Polimeni, J. R., & Wald, L. L. (2011). 32-Channel RF coil optimized for brain and cervical spinal cord at 3 T. Magnetic Resonance Imaging, 66(4), 1198-1208. External link
Cohen-Adad, J., Helmer, K. G., Belnner, T., Kinkel, R. P., Rosen, B. R., & Mainero, C. (2011, October). Characterization of cortical pathology using T2* mapping at 7T [Paper]. Joint Triennial Congress of the European and Americas Committees on Treatment and Research in Multiple Sclerosis, Amsterdam, The Netherlands. External link
Cohen-Adad, J., Helmer, K. G., Belnner, T., Wald, L. L., Nielsen, A. S., Kinkel, R. P., Rosen, B. R., & Mainero, C. (2011, November). Characterization of cortical pathology using T2* mapping at 7T [Paper]. Tykeson Fellows Conference, Dallas, Texas. Unavailable
Cohen-Adad, J., Helmer, K. G., Benner, T., Polimeni, J. R., McNab, J. A., Wald, L. L., Rosen, B. R., & Mainero, C. (2011, June). Cortical surface and depth analysis of T2* in the human brain [Paper]. 17th OHBM annual meeting, Québec, Canada. Unavailable
Cohen-Adad, J., El Mendili, M. M., Lehéricy, S., Pradat, P. F., Blancho, S., Rossignol, S., & Benali, H. (2011). Demyelination and degeneration in the injured human spinal cord detected with diffusion and magnetization transfer MRI. NeuroImage, 55(3), 1024-1033. External link
Cohen-Adad, J., El Mendili, M. M., Lehéricy, S., Pradat, P. F., Blancho, S., Rossignol, S., & Benali, H. (2011, May). Demyelination in the injured human spinal cord detected with diffusion and magnetization transfer imaging [Paper]. 19th ISMRM annual meeting and exhibition, Montréal, Québec. External link
Cohen-Adad, J., Buchbinder, B., Wald, L. L., & Oaklander, A. L. (2011, May). Evidence of Wallerian degeneration in the human spinal cord using in vivo high-resolution DTI and magnetization transfer [Paper]. 19th ISMRM annual meeting and exhibition, Montréal, Québec. External link
Cohen-Adad, J., Benner, T., Greve, D., Kinkel, R. P., Radding, A., Fischl, B., Rosen, B. R., & Mainero, C. (2011). In vivo evidence of disseminated subpial T2* signal changes in multiple sclerosis at 7T: A surface-based analysis. NeuroImage, 57(1), 55-62. External link
Cohen-Adad, J., El Mendili, M. M., Blancho, S., Morizot-Koutlidis, R., Lehéricy, S., Rossignol, S., Benali, H., & Pradat, P. F. (2011, June). Involvement of spinal sensory pathway inamyotrophic lateral sclerosis detected with DTI and magnetization transfer [Paper]. 17th OHBM annual meeting, Québec, Canada. External link
Cohen-Adad, J., Descoteaux, M., & Wald, L. L. (2011). Quality assessment of high angular resolution diffusion imaging data using bootstrap on Q-ball reconstruction. JMRI, 33(5), 1194-1208. External link
Cohen-Adad, J., Helmer, K. G., Nielsen, A. S., Greve, D. N., Benner, T., Kinkel, R. P., Rosen, B. R., & Mainero, C. (2011, May). Quantitative characterization of cortical pathology in multiple sclerosis using surface-based analysis of T2* relaxation at 7T [Paper]. 19th ISMRM annual meeting and exhibition, Montréal, QC, Canada. External link
Cohen-Adad, J., Leblond, H., Delivet-Mongrain, H., Martinez, M., Benali, H., & Rossignol, S. (2011). Wallerian degeneration after spinal cord lesions in cats detected with diffusion tensor imaging. NeuroImage, 57(3), 1068-1076. External link
Cohen-Adad, J., Descoteaux, M., & Wald, L. L. (2009, June). Assessing the quality of HARDI data using bootstrap on Qu-Ball reconstruction [Paper]. 16th OHBM annual meeting, Barcelona, Spain. Unavailable
Cohen-Adad, J., Gauthier, C. J., Brooks, J. C. W., Slessarev, M., Han, J., Fisher, J. A., Rossignol, S., & Hoge, R. D. (2010). BOLD signal responses to controlled hypercapnia in human spinal cord. NeuroImage, 50(3), 1074-1084. External link
Cohen-Adad, J., Mareyam, A., Polimeni, J. R., & Wald, L. L. (2009, June). Improving diffusion and functional MRI of the brain and spinal cord using a new 32ch coil [Paper]. 16th OHBM annual meeting, Barcelona, Spain. Unavailable
Cohen-Adad, J., McNab, J. A., Benner, T., Descoteaux, M., Mareyam, A., Wedeen, V. J., & Wald, L. L. (2010, May). Improving high-resolution Q-Ball imaging with a head insert gradient : bootstrap and SNR analysis [Paper]. 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. External link
Cohen-Adad, J., Greve, D. N., Benner, T., Radding, A., Kinkel, R., Rosen, B., Fischl, B., & Mainero, C. (2010, May). Surface-based analysis of subpial T2* signal changes at 7T in multiple sclerosis [Paper]. 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. External link
Cohen-Adad, J., Ghosh, A., Leblond, H., Descoteaux, M., Deriche, R., Benali, H., & Rossignol, S. (2009, June). Comparison of DTI and Q-Ball imaging metrics in a cat model of spinal cord injury [Paper]. 15th OHBM annual meeting, San Francisco, California. Unavailable
Cohen-Adad, J., Lundell, H., & Rossignol, S. (2009, April). Distortion correction in spinal cord DTI : what's the best approach? [Paper]. 17th ISMRM annual meeting and exhibition, Honolulu, Hawaii. External link
Cohen-Adad, J., Leblond, H., Ghosh, A., Descoteaux, M., Deriche, R., Benali, H., & Rossignol, S. (2009, April). Evolution of Q-Ball metrics for assessing the integrity of the injured spinal cord [Paper]. 17th ISMRM annual meeting and exhibition, Honolulu, Hawaii. External link
Cohen-Adad, J., Leblond, H., Delivet-Mongrain, H., Ghosh, A., Descoteaux, M., Deriche, R., Benali, H., & Rossignol, S. (2009, October). High angular resolution diffusion MRI of spinal cord injured cats [Paper]. 39th annual meeting of the Society for Neuroscience, Chicago, Illinois. Unavailable
Cohen-Adad, J., Hoge, R. D., Leblond, H., Xie, G., Beaudoin, G., Song, A. W., Krueger, G., Doyon, J., Benali, H., & Rossignol, S. (2009). Investigations on spinal cord fMRI of cats under ketamine. NeuroImage, 44(2), 328-339. External link
Cohen-Adad, J., Rossignol, S., & Hoge, R. D. (2009, April). Slice-by-slice motion correction in spinal cord fMRI : SliceCorr [Paper]. 17th ISMRM annual meeting and exhibition, Honolulu, Hawaii. External link
Cohen-Adad, J., Gauthier, C., Brooks, J. C. W., Leblond, H., Hoge, R. D., Fisher, J. A., Beaumont, E., Dubeau, S., Lesage, F., Doyon, J., Benali, H., & Rossignol, S. (2009, June). Venous effect in spinal cord fMRI : insights from intrinsic optical imaging and laser speckle [Paper]. 15th OHBM annual meeting, San Francisco, California. Unavailable
Cohen-Adad, J., Gauthier, C., Rossignol, S., Benali, H., & Hoge, R. D. (2008, May). BOLD signal responses to controlled hypercapnia in human spinal cord [Paper]. ISMRM 16th Scientific Meeting & Exhibition, Toronton, On. External link
Cohen-Adad, J., Descoteaux, M., Rossignol, S., Hoge, R. D., Deriche, R., & Benali, H. (2008). Detection of multiple pathways in the spinal cord using q-ball imaging. NeuroImage, 42(2), 739-749. External link
Cohen-Adad, J., Descoteaux, M., Rossignol, S., Hoge, R. D., Deriche, R., & Benali, H. (2008, May). Detection of multiple pathways in the spinal cord white matter using q-ball imaging [Paper]. 5th IEEE International Symposium on Biomedical Imaging : From Nano to Macro, Paris, France. External link
Cohen-Adad, J., Benali, H., Barrière, G., Leblond, H., Hoge, R. D., & Rossignol, S. (2008). Development of clinical diffusion tensor MRI of the spinal cord in a context of spincal cord injury. [Développement clinique de l'IRM du tenseur de diffusion de la moelle épinière dans un contexte de lésion médullaire]. IRBM, 29(4), 255-260. External link
Cohen-Adad, J., Benali, H., Hoge, R. D., & Rossignol, S. (2008). In vivo DTI of the healthy and injured cat spinal cord at high spatial and angular resolution. NeuroImage, 40(2), 685-697. External link
Cohen-Adad, J., Descoteaux, M., Deriche, R., Rossignol, S., Hodges, R. S., & Benali, H. (2008, May). Q-ball imaging of the spinal cord [Paper]. 16th ISMRM annual meeting and exhibition, Toronto, Ontario. External link
Cohen-Adad, J., Chapuisat, S., Doyon, J., Rossignol, S., Lina, J. M., Benali, H., & Lesage, F. (2007). Activation detection in diffuse optical imaging by means of the general linear model. Medical Image Analysis, 11(6), 616-629. External link
Cohen-Adad, J., Piche, M., Rainville, P., Benali, H., & Rossignol, S. (2007, August). Impact of realignment on spinal functional MRI time series [Paper]. 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Lyon, France. External link
Cohen-Adad, J., Benali, H., Hoge, R. D., & Rossignol, S. (2007, November). In vivo assessment of spinal cord integrity by diffusion tensor imaging [Paper]. 37th annual meeting of the Society for Neuroscience, San Diego, California. Unavailable
Cohen-Adad, J., Benali, H., & Rossignol, S. (2007, August). Methodology for MR diffusion tensor imaging of the cat spinal cord [Paper]. 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Lyon, France. External link
Cohen-Adad, J., Benali, H., Hoge, R. D., Barrière, G., Doyon, J., & Rossignol, S. (2007, January). Spinal cord in vivo diffusion tensor imaging of healthy human and spinalized cats [Paper]. 13th OHBM annual meeting, San Francisco, California. Unavailable
Cohen-Adad, J., Paul, P., Morandi, X., & Jannin, P. (2006, March). Knowledge modeling in image-guided neurosurgery : application in understanding intra-operative brain shift [Paper]. SPIE Medical Imaging, San Diego, California (8 pages). External link
Cohen-Adad, J., Perlbarg, V., Doyon, J., Hoge, R. D., Beaudoin, G., Song, A., Leblond, H., Provencher, J., Rossignol, S., & Benali, H. (2006, January). Methodology to study functional MRI of the cat lumbar spinal cord [Paper]. 12th OHBM annual meeting, Florence, Italy. Unavailable
D'Astous, A., Cereza, G., Papp, D., Gilbert, K. M., Stockmann, J. P., Alonso Ortiz, E., & Cohen-Adad, J. (2023). Shimming toolbox: An open-source software toolbox for B0 and B1 shimming in MRI. Magnetic Resonance in Medicine, 89(4), 1401-1417. External link
D'Astous, A., Kaptan, M., Dabbagh, A., Finsterbusch, J., Eippert, F., Alonso Ortiz, E., & Cohen-Adad, J. (2023, June). Slice-wise z-shimming for spinal cord fMRI with shimming toolbox [Presentation]. In ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Daeschler, S. C., Bourget, M.-H., Derakhshan, D., Sharma, V., Asenov, S. I., Gordon, T., Cohen-Adad, J., & Borschel, G. H. (2022). Rapid, automated nerve histomorphometry through open-source artificial intelligence. Scientific Reports, 12(1), 5975 (13 pages). External link
de la Colina, A. N., Badji, A., Robitaille-Grou, M.-C., Gagnon, C., Boshkovski, T., Lamarre-Cliche, M., Joubert, S., Gauthier, C. J., Bherer, L., Cohen-Adad, J., & Girouard, H. (2021). Associations Between Relative Morning Blood Pressure, Cerebral Blood Flow, and Memory in Older Adults Treated and Controlled for Hypertension. Hypertension, 77(5), 1703-1713. External link
D'Astous, A., Topfer, R., Cereza, G., Alonso Ortiz, E., Craven-Brightman, L., Stockmann, J., & Cohen-Adad, J. (2021, May). Shimming-toolbox : an open-source software package for performing realtime B0 shimming experiments [Paper]. ISMRM & SMRT annual Meeting & exhibition (ISMRM 2021). External link
De Leener, B., Soltrand Dahlberg, L., Khatibi, A., Cohen-Adad, J., & Doyon, J. (2020, August). Effect of non-protonated perfluorocarbon liquid-filled SatPads on spinal cord MRI imaging [Presentation]. In 2020 Joint annual meeting ISMRM & ISMRT. External link
de la Colina, A. N., Badji, A., Joubert, S., Bherer, L., Lamarre-Cliche, M., Gauthier, C., Cohen-Adad, J., & Girouard, H. (2019). Augmentation index is a predictor of cerebral blood flow across global gray matter in the elderly. Innovation in Aging, 3(S1), 1 page. Available
de la Colina, A. N., Badji, A., Sabra, D., Karakuzu, A., Joubert, S., Bherer, L., Lamarre-Cliche, M., Gauthier, C., Cohen-Adad, J., & Girouard, H. (2019, July). Augmentation index is a predictor of cerebral blood flow across global grey matter in the elderly [Abstract]. 29th International Symposium on Cerebral Blood Flow, Metabolism and Function / 14th International Conference on Quantification of Brain Function with PET (BRAIN 2019 and BRAIN Pet 2019), Yokohama, JAPAN. Published in Journal of Cerebral Blood Flow and Metabolism, 39(1_suppl). External link
Duval, T., Saliani, A., Nami, H., Nanci, A., Stikov, N., Leblond, H., & Cohen-Adad, J. (2019). Axons morphometry in the human spinal cord. NeuroImage, 185, 119-128. External link
DiNuzzo, M., Cohen-Adad, J., Mangini, F., Maugeri, L., Moraschi, M., Mascali, D., Giove, F., & Fratini, M. (2019, May). Towards a standard pipeline for the analysis of human spinal cord fMRI data series [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
David, G., Mohammadi, S., Martin, A. R., Cohen-Adad, J., Weiskopf, N., Thompson, A., & Freund, P. (2019). Traumatic and nontraumatic spinal cord injury: pathological insights from neuroimaging. Nature Reviews Neurology, 15(12), 718-731. External link
De Leener, B., Fonov, V. S., Collins, D. L., Callot, V., Stikov, N., & Cohen-Adad, J. (2018). PAM50: Unbiased multimodal template of the brainstem and spinal cord aligned with the ICBM152 space. NeuroImage, 165, 170-179. External link
De Tillieux, P., Topfer, R., Foias, A., Leroux, I., El Maâchi, I., Leblond, H., Stikov, N., & Cohen-Adad, J. (2018). A pneumatic phantom for mimicking respiration-induced artifacts in spinal MRI. Magnetic Resonance in Medicine, 79(1), 600-605. External link
Duval, T., Leppert, I. R., Cabana, J.-F., Boudreau, M., Gagnon, I., Berestovoy, G., Cohen-Adad, J., & Stikov, N. (2018, June). Quantitative MRI made easy with qMRLab [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Duval, T., Smith, V., Stikov, N., Klawiter, E. C., & Cohen-Adad, J. (2018). Scan-rescan of axcaliber, macromolecular tissue volume, and g-ratio in the spinal cord. Magnetic Resonance in Medicine, 79(5), 2759-2765. External link
Dupont, S. M., Martin, A. R., Stikov, N., Fehlings, M. G., & Cohen-Adad, J. (2017, April). Fully automatic segmentation of spinal cord gray matter on patients with degenerative cervical myelopathy [Poster]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Dupont, S. M., De Leener, B., Taso, M., Le Troter, A., Nadeau, S., Stikov, N., Callot, V., & Cohen-Adad, J. (2017). Fully-integrated framework for the segmentation and registration of the spinal cord white and gray matter. NeuroImage, 150, 358-372. External link
Duval, T., Levy, S., Stikov, N., Campbell, J., Mezer, A., Witzel, T., Keil, B., Smith, V., Wald, L. L., Klawiter, E., & Cohen-Adad, J. (2017). g-Ratio weighted imaging of the human spinal cord in vivo. NeuroImage, 145(A), 11-23. External link
De Leener, B., Fonov, V., Collins, D. L., Callot, V., Stikov, N., & Cohen-Adad, J. (2017, April). PAM50 : multimodal template of the brainstem and spinal cord compatible with the ICBM152 space [Poster]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
De Leener, B., Granberg, T., Fink, K., Stikov, N., & Cohen-Adad, J. (2017, April). Repeatability and reproducibility of spinal cord atrophy measurements in a multiple sclerosis population using the spinal cord toolbox [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Duval, T., Smith, V., Mingasson, T., Klawiter, E., Stikov, N., & Cohen-Adad, J. (2017, April). Scan-rescan of AxCaliber, macromolecular tissue volume and g-ratio in the spinal cord [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
De Leener, B., Lévy, S., Dupont, S. M., Fonov, V. S., Stikov, N., Collins, D. L., Callot, V., & Cohen-Adad, J. (2017). SCT: Spinal Cord Toolbox, an open-source software for processing spinal cord MRI data. NeuroImage, 145, 24-43. External link
De Leener, B., Mangeat, G., Dupont, S., Martin, A. R., Callot, V., Stikov, N., Fehlings, M. G., & Cohen-Adad, J. (2017). Topologically Preserving Straightening of Spinal Cord MRI. Journal of Magnetic Resonance Imaging, 46(4), 1209-1219. External link
Duval, T., Mingasson, T., Klawiter, E., Stikov, N., & Cohen-Adad, J. (2017, April). Translating AxCaliber on a clinical system : 600mT/m versus optimized 80mT/m protocol [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Dupont, S., De Leener, B., Taso, M., Stikov, N., Callot, V., & Cohen-Adad, J. (2016, May). Fully-integrated framework for registration of spinal cord white and gray matter [Poster]. 24th Annual Meeting of ISMRM, Singapore. External link
De Leener, B., Taso, M., Fonov, V., Le Troter, A., Stikov, N., Collins, L., Callot, V., & Cohen-Adad, J. (2016, May). Fully-integrated T1, T2, T2*, white and gray matter atlases of the spinal cord [Poster]. 24th Annual Meeting of ISMRM, Singapore. External link
Duval, T., Stikov, N., & Cohen-Adad, J. (2016). Modeling white matter microstructure. Functional Neurology, 31(4), 217-228. External link
De Leener, B., Taso, M., Cohen-Adad, J., & Callot, V. (2016). Segmentation of the human spinal cord. Magnetic Resonance Materials in Physics, Biology and Medicine, 29(2), 125-153. External link
Duval, T., Perraud, B., Vuong, M.-T., Lopez Rios, N., Stikov, N., & Cohen-Adad, J. (2016, May). Validation of quantitative MRI metrics using full slice histology with automatic axon segmentation [Poster]. 24th Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Singapore. External link
De Leener, B., Cohen-Adad, J., & Kadoury, S. (2015). Automatic Segmentation of the spinal cord and spinal canal coupled with vertebral labeling. IEEE Transactions on Medical Imaging, 34(8), 1705-1718. External link
Duval, T., Witzel, T., Keil, B., Wald, L. L., Smith, V., Klawiter, E. C., & Cohen-Adad, J. (2015, May). Impact of noise bias with parallel imaging for axon diameter estimation with q-space MR [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
Duval, T., McNab, J. A., Setsompop, K., Witzel, T., Schneider, T., Huang, S. Y., Keil, B., Klawiter, E. C., Wald, L. L., & Cohen-Adad, J. (2015). In vivo mapping of human spinal cord microstructure at 300 mT/m. NeuroImage, 118, 494-507. External link
Duval, T., Levy, S., Mezer, A., Witzel, T., Keil, B., Smith, V., Wald, L. L., Klawiter, E. C., & Cohen-Adad, J. (2015, May). In vivo mapping of myelin g-ratio in the human spinal cord [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Canada. External link
De Leener, B., Roux, A., Taso, M., Callot, V., & Cohen-Adad, J. (2015, May). Spinal cord gray and white matter segmentation using atlas deformation [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
De Leener, B., Roux, A., Levy, S., Duval, T., & Cohen-Adad, J. (2015, May). Spinal Cord Toolbox: Automated Software For Processing Quantitative MRI Data Of The Spinal Cord [Paper]. 4th ISCoS And Asia Joint Scientific Meeting, Montréal, Québec. Unavailable
De Leener, B., Roux, A., Touati, J., Levy, S., Taso, M., Fonov, V., Collins, D. L., Callot, V., & Cohen-Adad, J. (2015, May). Template-based analysis of multi-parametric MRI data with the Spinal Cord Toolbox [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
Duval, T., Gasecka, A., Pouliot, P., Côté, D., Stikov, N., & Cohen-Adad, J. (2015, May). Validation of MRI microstructure measurements with Coherent Anti-Stokes Raman Scattering (CARS) [Poster]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
De Leener, B., Cohen-Adad, J., & Kadoury, S. (2014, February). Automatic 3D segmentation of spinal cord MRI using propagated deformable models [Paper]. Medical Imaging 2014: Image Processing, San Diego, California, USA. External link
Duval, T., McNab, J. A., Setsompop, K., Witzel, T., Schneider, T., Huang, S. Y., Keil, B., Klawiter, E. C., Wald, L. L., & Cohen-Adad, J. (2014, May). In vivo estimation of axon diameter in the human spinal cord using 300 mT/m gradients [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
De Leener, B., Ullmann, E., Kadoury, S., & Cohen-Adad, J. (2014, June). PropSeg : automatic spinal cord segmentation method for MR images using propagated deformation models [Paper]. 20th Annual Meeting of OHBM, Hamburg, Germany. Unavailable
De Leener, B., Kadoury, S., & Cohen-Adad, J. (2014). Robust, accurate and fast automatic segmentation of the spinal cord. NeuroImage, 98, 528-536. External link
Enguix, V., Kenley, J., Luck, D., Cohen-Adad, J., & Lodygensky, G. A. (2022). NeoRS: A Neonatal Resting State fMRI Data Preprocessing Pipeline. Frontiers in Neuroinformatics, 16, 843114 (16 pages). External link
Enguix, V., Ding, Y., Luck, D., Cohen-Adad, J., & Lodygensky, G. (2020, June). Neonatal functional connectivity MRI preprocessing toolbox [Paper]. 26th OHBM annual meeting. Unavailable
Eden, D., Gros, C., Badji, A., Dupont, S. M., De Leener, B., Maranzano, J., Zhuoquiong, R., Liu, Y., Granberg, T., Ouellette, R., Stawiarz, L., Hillert, J., Talbott, J., Bannier, É., Kerbrat, A., Edan, G., Labauge, P., Callot, V., Pelletier, J., ... Cohen-Adad, J. (2019). Spatial distribution of multiple sclerosis lesions in the cervical spinal cord. Brain, 142(3), 633-646. External link
Eden, D., Gros, C., Badji, A., Dupont, S., Maranzano, J., Zhuoquiong, R., Liu, Y., Talbott, J., Bannier, É., Kerbrat, A., Edan, G., Labauge, P., Callot, V., Pelletier, J., Audoin, B., Rasoanandrianina, H., Valsasina, P., Filippi, M., Bakshi, R., ... Cohen-Adad, J. (2018, June). Spatial distribution of multiple sclerosis in the cervical cord [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Eichner, C., Cauley, S. F., Cohen-Adad, J., Möller, H. E., Turner, R., Setsompop, K., & Wald, L. L. (2015). Real diffusion-weighted MRI enabling true signal averaging and increased diffusion contrast. NeuroImage, 122, 373-384. External link
El Mendili, M.-M., Chen, R., Tiret, B., Pélégrini-Issac, M., Cohen-Adad, J., Lehéricy, S., Pradat, P.-F., & Benali, H. (2015). Validation of a semiautomated spinal cord segmentation method. Journal of Magnetic Resonance Imaging, 41(2), 454-459. External link
Ellingson, B. M., & Cohen-Adad, J. (2014). Diffusion-Weighted Imaging of the Spinal Cord. In Quantitative MRI of the Spinal Cord (pp. 123-145). External link
El Mendili, M.-M., Cohen-Adad, J., Pelegrini-Issac, M., Rossignol, S., Morizot-Koutlidis, R., Marchand-Pauvert, V., Iglesias, C., Sangari, S., Katz, R., Lehericy, S., Benali, H., & Pradat, P.-F. (2014). Multi-Parametric Spinal Cord MRI as Potential Progression Marker in Amyotrophic Lateral Sclerosis. PLOS One, 9(4), e95516. Available
El Mendili, M. M., Chen, R., Pélégrini-Issac, M., Cohen-Adad, J., Lehéricy, S., Benali, H., & Pradat, P. F. (2013, May). Validation of a cord atrophy measurements method in motor neuron diseases [Paper]. 11th Annual meeting of the European Network for the cure of ALS (ENCALS), Sheffield, United Kingdom. Unavailable
El Mendili, M.-M., Cohen-Adad, J., Blancho, S., Morizot-Koutlidis, R., Lehéricy, S., Rossignol, S., Benali, H., & Pradat, P.-F. (2012, May). Spinal MRI atrophy study in amyotrophic lateral sclerosis and spinal muscular atrophy [Paper]. 10th annual ENCALS European Network for the Cure for ALS, Dublin, Irelande. External link
Freund, P., Boller, V., Emmenegger, T. M., Akbar, M., Hupp, M., Pfender, N., Wheeler-Kingshott, C. A. M. G., Cohen-Adad, J., Fehlings, M. G., Curt, A., & Seif, M. (2024). Quantifying neurodegeneration of the cervical cord and brain in degenerative cervical myelopathy: A multicentre study using quantitative magnetic resonance imaging. European Journal of Neurology, e16297 (12 pages). External link
Fratini, M., Moraschi, M., Maugeri, L., Tommasin, S., DiNuzzo, M., Cohen-Adad, J., Magini, F., Mascali, D., & Giove, F. (2021, May). Development of an optimized approach to spinal cord fMRI based on the combinaitionof an ad hoc acquisition method and data analysis [Poster]. 2021 Joint annual meeting ISMRM & ISMRT. External link
Farooq, H., Genis, H., Alarcon, J., Vuong, B., Jivraj, J., Yang, V. X. D., Cohen-Adad, J., Fehlings, M. G., & Cadotte, D. W. (2015). High-resolution imaging of the central nervous system: how novel imaging methods combined with navigation strategies will advance patient care. In Dancause, N., Nadeau, S., & Rossignol, S. (eds.), Sensorimotor rehabilitation at the crossroads of basic and clinical sciences (Vol. 218, pp. 55-78). External link
Fonov, V. S., Le Troter, A., Taso, M., De Leener, B., Lévêque, G., Benhamou, M., Sdika, M., Benali, H., Pradat, P.-F., Collins, D. L., Callot, V., & Cohen-Adad, J. (2014). Framework for integrated MRI average of the spinal cord white and gray matter: The MNI-Poly-AMU template. NeuroImage, 102, 817-827. External link
Fonov, V., Le Troter, A., Taso, M., Leveque, G., Benhamou, M., Sdika, M., Collins, D. L., Callot, V., & Cohen-Adad, J. (2014, May). MNI-Poly-AMU average anatomical template for automatic spinal cord measurements [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
Gros, C., Lemay, A., Vincent, O., Rouhier, L., Bourget, M.-H., Bucquet, A., Cohen, P., & Cohen-Adad, J. (2021). Ivadomed : a medical imaging deep learning toolbox. Journal of Open Source Software, 6(58), 5 pages. External link
Gros, C., Lemay, A., & Cohen-Adad, J. (2021). SoftSeg: Advantages of soft versus binary training for image segmentation. Medical Image Analysis, 71, 12 pages. External link
Gros, C., Asiri, A., De Leener, B., Watson, C., Cowin, G., Ruitenberg, M., Kurniawan, N., & Cohen-Adad, J. (2020, August). Ex vivo MRI template of the human cervical cord at 80μm isotropic resolution [Presentation]. In 2020 Joint annual meeting ISMRM & ISMRT. External link
Grussu, F., Battiston, M., Veraart, J., Schneider, T., Cohen-Adad, J., Shepherd, T. M., Alexander, D. C., Fieremans, E., Novikov, D. S., & Wheeler-Kingshott, C. A. M. G. (2020). Multi-parametric quantitative in vivo spinal cord MRI with unified signal readout and image denoising. NeuroImage, 217, 116884 (16 pages). External link
Gros, C., De Leener, B., Badji, A., Maranzano, J., Eden, D., Dupont, S. M., Talbott, J., Zhuoquiong, R., Liu, Y., Granberg, T., Ouellette, R., Tachibana, Y., Hori, M., Kamiya, K., Chougar, L., Stawiarz, L., Hillert, J., Bannier, É., Kerbrat, A., ... Cohen-Adad, J. (2019). Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks. NeuroImage, 184, 901-915. External link
Gros, C., Badji, A., Maranzano, J., Zhuoquiong, R., Yaou, L., Bannier, É., Kerbrat, A., Edan, G., Labauge, P., Callot, V., Pelletier, J., Audoin, B., Rasoanandrianina, H., Valsasina, P., Filippi, M., Bakshi, R., Tauhid, S., Prados, F., Yiannakas, M. C., ... Cohen-Adad, J. (2018, June). Automatic MS lesion segmentation in the spinal cord using deep learning [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Gros, C., De Leener, B., Dupont, S. M., Martin, A. R., Fehlings, M. G., Bakshi, R., Tummala, S., Auclair, V., McLaren, D. G., Callot, V., Cohen-Adad, J., & Sdika, M. (2018). Automatic spinal cord localization, robust to MRI contrasts using global curve optimization. Medical Image Analysis, 44, 215-227. External link
Grussu, F., Veraart, J., Battiston, M., Schneider, T., Cohen-Adad, J., Cardoso, M. J., Wheeler-Kingshott, C. A. M. G., Fieremans, E., Alexander, D. C., & Novikov, D. S. (2018, June). Magnitude versus complex-valued images for spinal cord diffusion MRI : which one is best? [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Grussu, F., Battiston, M., Veraart, J., Schneider, T., Cohen-Adad, J., Cardoso, M. J., Alexander, D. C., Novikov, D. S., Fieremans, E., & Wheeler-Kingshott, C. A. M. G. (2018, June). A unified signal readout improves denoising of multi-modal spinal cord MRI [Paper]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Granberg, T., Fan, Q., Treaba, C. A., Ouellette, R., Herranz, E., Mangeat, G., Louapre, C., Cohen-Adad, J., Klawiter, E. C., Sloane, J. A., & Mainero, C. (2017). In vivo characterization of cortical and white matter neuroaxonal pathology in early multiple sclerosis. Brain, 140(11), 2912-2926. External link
Granberg, T., Fan, Q., Andrada Treaba, C., Ouellette, R., Herranz, E., Mangeat, G., Louapre, C., Cohen-Adad, J., Klawiter, E., Sloane, J., & Mainero, C. (2017, April). In vivo characterization of cortical and white matter neuroaxonal pathology in early multiple sclerosis (S2.005) [Paper]. 69th AAN Annual Meeting, Boston. Unavailable
Gros, C., De Leener, B., Dupont, S. M., Martin, A. R., Fehlings, M. G., Bakshi, R., Tummala, S., Auclair, V., McLaren, D. G., Callot, V., Sdika, M., & Cohen-Adad, J. (2017, September). OptiC: Robust and automatic spinal cord localization on a large variety of MRI data using a distance transform based global optimization [Paper]. 20th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2017), Québec City, QC, Canada. External link
Gros, C., De Leener, B., Martin, A. R., Fehlings, M. G., Callot, V., Stikov, N., & Cohen-Adad, J. (2017, April). Robust and automatic spinal cord detection on multiple MRI contrasts using machine learning [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Germain, G., Stockmann, J., Topfer, R., Wald, L. L., Stikov, N., & Cohen-Adad, J. (2016, May). Optimization of geometry for combined RF/shim coil arrays for the spinal cord [Poster]. 24th Annual Meeting of ISMRM, Singapore. External link
Gagnon, L., Sakadzic, S., Lesage, F., Musacchia, J. J., Lefebvre, J., Fang, Q., Yücel, M. A., Evans, K., Mandeville, E. T., Cohen-Adad, J., Polimeni, J. R., Yaseen, M. A., Lo, E. H., Greve, D. N., Buxton, R. B., Dale, A. M., Devor, A., & Boas, D. A. (2015). Quantifying the Microvascular Origin of BOLD-fMRI from First Principles with Two-Photon Microscopy and an Oxygen-Sensitive Nanoprobe. Journal of Neuroscience, 35(8), 3663-3675. External link
Govindarajan, S. T., Cohen-Adad, J., Sormani, M. P., Fan, A. P., Louapre, C., & Mainero, C. (2015). Reproducibility of T-2* mapping in the human cerebral cortex in vivo at 7 tesla MRI. Journal of Magnetic Resonance Imaging, 42(2), 290-296. External link
Gagnon, L., Sakadžić, S., Lesage, F., Musacchia, J. J., Lefebvre, J., Fang, Q., Yücel, M. A., Evans, K. C., Mandeville, E. T., Cohen-Adad, J., Polimeni, J. R., Yaseen, M. A., Lo, E. H., Greve, D. N., Buxton, R. B., Dale, A. M., Devor, A., & Boas, D. A. (2014, April). Underpinning the microvascular origin of BOLD-fMRI with two-photon microscopy [Paper]. Biomedical Optics 2014, Miami, FL, USA. External link
Govindarajan, S. T., Cohen-Adad, J., Fan, A., Sormani, M. P., & Mainero, C. (2013, April). Laminar-specific variations of T2* relaxation devay in the cortex at 7 Tesla MRI [Paper]. ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. External link
Govindarajan, S. T., Sormani, M. P., Cohen-Adad, J., & Mainero, C. (2012, October). Reproducibility of surface-based laminar measures of T2* relaxation decay in the cortex at 7 Tesla MRI [Paper]. 28th congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS 2012), Lyon, France. External link
Gauthier, C., Cohen-Adad, J., Brooks, J. C. W., Fisher, J. A., Rossignol, S., & Hoge, R. D. (2009, June). Comparison of hypercapnia-induced BOLD changes in the brain and spinal cord [Paper]. 15th OHBM annual meeting, San Francisco, California. Unavailable
Gauthier, C., Cohen-Adad, J., Brooks, J., Rossignol, S., & Hoge, R. D. (2009, April). Investigation of venous effects in spinal cord fMRI using hypercapnia [Paper]. 17th ISMRM annual meeting and exhibition, Honolulu, Hawaii. External link
Hori, M., Hagiwara, A., Yokoyama, K., Fukunaga, I., Sano, K., Kamagata, K., Murata, K., Fujita, S., Andica, C., Wada, A., Kamiya, K., Cohen-Adad, J., & Aoki, S. (2023, June). Anisotropic and Isotropic Kurtosis Estimation of Spinal Cord Microstructure in Multiple Sclerosis and Neuromyelitis Optica Spectrum Disorder [Poster]. ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Heidari, M., Kazerouni, A., Soltany, M., Azad, R., Khodapanah Aghdam, E., Cohen-Adad, J., & Merhof, D. (2023, January). HiFormer: hierarchical multi-scale representations uUsing transformers for medical image segmentation [Paper]. Winter Conference on Applications of Computer Vision (WACV 2023), Waikoloa, Hawaii. External link
Hatipoglu, O., Charidimos, T., Ocampo-Pineda, M., Melie-Garcia, L., Weigel, M., Lu, P.-J., Barakovic, M., Cohen-Adad, J., Kappos, L., Kuhle, J., & Granziera, C. (2023, June). Quantifying Cervical Spinal Cord Pathology Of Multiple Sclerosis Patients Using Advanced MRI [Presentation]. In ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Hori, M., Maekawa, T., Kamiya, K., Hagiwara, A., Goto, M., Takemura, M. Y., Fujita, S., Andica, C., Kamagata, K., Cohen-Adad, J., & Aoki, S. (2022). Advanced Diffusion MR Imaging for Multiple Sclerosis in the Brain and Spinal Cord. Magnetic Resonance in Medical Sciences, 21(1), 58-70. External link
Huang, Y. N., Meftah, E.-M., Pion, C. H., Mac-Thiong, J.-M., Cohen-Adad, J., & Barthelemy, D. (2022). Quantitative electrophysiological assessments as predictive markers of lower limb motor recovery after spinal cord injury: a pilot study with an adaptive trial design. Spinal Cord Series and Cases, 8(1), 26 (8 pages). External link
Hori, M., Kamiya, K., Hagiwara, A., Yokoyama, K., Fukunaga, I., Sano, K., Kamagata, K., Murata, K., Fujita, S., Andica, C., Wada, A., Cohen-Adad, J., & Aoki, S. (2021, May). Spinal cord neurodegeneration rostral and caudal to a degenerative cervical myelopathy (DCM) : a quantitative MRI study [Poster]. 2021 Joint annual meeting ISMRM & ISMRT. External link
Herranz, E., Louapre, C., Treaba, C. A., Govindarajan, S. T., Ouellette, R., Mangeat, G., Loggia, M. L., Cohen-Adad, J., Klawiter, E. C., Sloane, J. A., & Mainero, C. (2020). Profiles of cortical inflammation in multiple sclerosis by ¹¹C-PBR28 MR-PET and 7 Tesla imaging. Multiple Sclerosis Journal, 26(12), 1497-1509. External link
Hori, M., Hagiwara, A., Yokoyama, K., Kamiya, K., Funkunaga, I., Maekawa, T., Kamagata, K., Murata, K., Fujita, S., Irie, R., Andicca, C., Kumamaru, K. K., Wada, A., Cohen-Adad, J., & Aoki, S. (2019, May). Application of spinal cord white matter tract integrity quantification with atlas-based analysis in multiple sclerosis and neuromyelitis optica spectrum disorder [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
Hagiwara, A., Hori, M., Cohen-Adad, J., Nakazawa, M., Suzuki, Y., Kasahara, A., Horita, M., Haruyama, T., Andica, C., Maekawa, T., Kamagata, K., Kumamaru, K. K., Abe, O., & Aoki, S. (2018). Linearity, Bias, Intrascanner Repeatability, and Interscanner Reproducibility of Quantitative Multidynamic Multiecho Sequence for Rapid Simultaneous Relaxometry at 3 T: A Validation Study With a Standardized Phantom and Healthy Controls. Investigative Radiology, 54(1), 39-47. External link
Hafyane, T., Duquette, C., Mongeon, F. P., & Cohen-Adad, J. (2017, February). Bringing the T1 mapping sequences together : a study of T2 effects in ex vivo pig hearts [Poster]. 20th SCMR annual scientific Session, Washington, D.C.. External link
Huang, S. Y., Nummenmaa, A., Witzel, T., Duval, T., Cohen-Adad, J., Wald, L. L., & McNab, J. A. (2015). The impact of gradient strength on in vivo diffusion MRI estimates of axon diameter. NeuroImage, 106, 464-472. External link
Hendrix, P., Griessenauer, C. J., Cohen-Adad, J., Rajasekaran, S., Cauley, K. A., Shoja, M. M., Pezeshk, P., & Tubbs, R. S. (2015). Spinal diffusion tensor imaging: A comprehensive review with emphasis on spinal cord anatomy and clinical applications. Clinical Anatomy, 28(1), 88-95. External link
Huang, S. Y., Nummenmaa, A., Witzel, T., Duval, T., Cohen-Adad, J., Wald, L. L., & McNab, J. A. (2014, May). The impact of gradient strength on in vivo diffusion of MRI estimates of axon diameter [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
Karthik, E. N., Valošek, J., Smith, A. C., Pfyffer, D., Schading, S., Farner, L., Weber, K. A., Freund, P., & Cohen-Adad, J. (2024). SCIseg: Automatic Segmentation of Intramedullary Lesions in Spinal Cord Injury on T2-weighted MRI Scans. Radiology Artificial Intelligence. External link
Keegan, B. M., Absinta, M., Cohen-Adad, J., Flanagan, E. P., Henry, R. G., Klawiter, E. C., Kolind, S., Krieger, S., Laule, C., Lincoln, J. A., Messina, S. A., Oh, J., Papinutto, N., Smith, S. A., & Traboulsee, A. (2024). Spinal cord evaluation in multiple sclerosis: clinical and radiological associations, present and future. Brain Communications. External link
Khatibi, A., Vahdat, S., Lungu, O., Finsterbusch, J., Büchel, C., Cohen-Adad, J., Marchand-Pauvert, V., & Doyon, J. (2022). Brain-spinal cord interaction in long-term motor sequence learning in human: An fMRI study. NeuroImage, 253, 11 pages. External link
Karakuzu, A., Biswas, L., Cohen-Adad, J., & Stikov, N. (2022). Vendor-neutral sequences and fully transparent workflows improve inter-vendor reproducibility of quantitative MRI. Magnetic Resonance in Medicine, 88(3), 1212-1228. External link
Karbasforoushan, H., Cohen-Adad, J., & Dewald, J. P. A. (2020). Author Correction: Brainstem and spinal cord MRI identifies altered sensorimotor pathways post-stroke. Nature Communications, 11(1), 1 page. External link
Kerbrat, A., Gros, C., Badji, A., Bannier, É., Galassi, F., Combes, B., Chouteau, R., Labauge, P., Ayrignac, X., Carra-Dalliere, C., Maranzano, J., Granberg, T., Ouellette, R., Stawiarz, L., Hillert, J., Talbott, J., Tachibana, Y., Hori, M., Kamiya, K., ... Cohen-Adad, J. (2020). Multiple sclerosis lesions in motor tracts from brain to cervical cord: spatial distribution and correlation with disability. Brain, 143(7), 2089-2105. External link
Karakuzu, A., Boudreau, M., Duval, T., Boshkovski, T., Leppert, I., Cabana, J.-F., Gagnon, I., Beliveau, P., Pike, G. B., Cohen-Adad, J., & Stikov, N. (2020). qMRLab: Quantitative MRI analysis, under one umbrella. Journal of Open Source Software, 5(53), 2343 (4 pages). Available
Karakuzu, A., Boudreau, M., Cohen-Adad, J., & Stikov, N. (2020, August). Thinking outside the black box: A fully transparent T1 mapping pipeline [Poster]. 2020 Joint annual meeting ISMRM & ISMRT. External link
Karbasforoushan, H., Cohen-Adad, J., & Dewald, J. P. A. (2019). Brainstem and spinal cord MRI identifies altered sensorimotor pathways post-stroke. Nature Communications, 10(1), 3524 (7 pages). Available
Kerbrat, A., Gros, C., Badji, A., Bannier, E., Combes, B., Galassi, F., Labauge, P., Ayrignac, X., Dalliere, C. C., Pinna, F., De Leener, B., Eden, D., Maranzano, J., Zhuoquiong, R., Granberg, T., Stawiarz, L., Hillert, J., Ouellette, R., Talbott, J., ... Cohen-Adad, J. (2019, September). Multiple sclerosis lesions in motor tracts from the brain to the cervical cord: spatial distribution and correlation with functional deficits [Abstract]. 35th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS 2019) and 24th Annual Conference of Rehabilitation in MS, Stockholm, Sweden. Published in Multiple Sclerosis Journal, 25(2_suppl). External link
Karakuzu, A., Cohen-Adad, J., Stikov, N., & Yucesoy, C. A. (2019, July). On the reproducibility of MRI-DTI based passeive lenght changes and the added implications of quantitative MRI [Abstract]. 2019 27th ISB Congress and 43rd ASB annual Meeting, Calgary, AB, Canada. Unavailable
Karakuzu, A., Boudreau, M., Duval, T., Leppert, I. R., Cohen-Adad, J., & Stikov, N. (2019, July). qMRLab : an open source software project for streaming quantitative magnetic resonance imaging [Abstract]. 2019 27th ISB Congress and 43rd ASB annual Meeting, Calgary, AB, Canada. Unavailable
Karakuzu, A., Boudreau, M., Duval, T., Leppert, I. R., Boshkovski, T., Cohen-Adad, J., & Stikov, N. (2019, May). The qMRLab workflow : form acquisition to publication [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
Kerbrat, A., Gros, C., Badji, A., Bannier, É., Galassi, F., Combes, B., Labauge, P., Ayrignac, X., Dallière, C. C., Pinna, F., De Leener, B., Eden, D., Maranzano, J., Zhuoquiong, R., Granbert, T., Stawiarz, L., Hillert, J., Ouellette, R., Talbott, J. F., ... Cohen-Adad, J. (2019, May). Spatial distribution of multiple sclerosis lesions along the brain and spinal motor tracts and correlation with functional deficits [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, QC, Canada. External link
Karbasforoushan, H., Cohen-Adad, J., & Dewald, J. P. A. (2018, November). Corticospinal tract morphometry at the cervical spinal cord in chronic hemiparetic stroke [Paper]. Neuroscience, San Diego, California. External link
Khatibi, A., Shahabeddin, V., Lungu, O., Cayour, C., Finsterbusch, J., Marchand-Pauvert, V., Cohen-Adad, J., Benali, H., & Doyon, J. (2018, June). Spinal cord contribution to long-term motor skill learning [Paper]. OHBM Annual Meeting, Singapore. External link
Karakuzu, A., Pernet, C., Duval, T., Cohen-Adad, J., & Stikov, N. (2018, June). A statistical framework for evaluating the reliability of myelin imaging [Paper]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Khoshnejad, M., Roy, M., Martinu, K., Chen, J.-I., Cohen-Adad, J., Grondin, S., & Rainville, P. (2017). Brain processing of the temporal dimension of acute pain in short-term memory. Pain, 158(10), 2001-2011. External link
Keil, B., Cohen-Adad, J., Porter, D. A., Biber, S., Heberlein, K., Triantafyllou, C., & Wald, L. L. (2013, April). Simultaneous diffusion-weighted MRI of brain and cervical spinal cord using a 64-channel head-neck array coil at 3T [Paper]. ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. External link
Labounek, R., Bondy, M. T., Paulson, A. L., Bédard, S., Abramovic, M., Alonso-Ortiz, E., Atcheson, N. T., Barlow, L. R., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A., Leener, B. D., Descoteaux, M., Loureiro de Sousa, P., Dostál, M., ... Nestrašil, I. (2024). Body size interacts with the structure of the central nervous system: A multi-center in vivo neuroimaging study. bioRxiv, 32 pages. External link
Lemay, A., Gros, C., Karthik, E. N., & Cohen-Adad, J. (2023). Label fusion and training methods for reliable representation of inter-rater uncertainty. The Journal of Machine Learning for Biomedical Imaging, 1(January 20), 1-27. External link
Le Troter, A., Laines Medina, N. J., Mchinda, S., Cohen-Adad, J., & Callot, V. (2023, June). AMU7T : a 3D qT1 and T2*w high-resolution in vivo template with refined white and gray matter parcellation dedicated to 7T spinal cord MR analyses [Presentation]. In ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Lee, L., Cohen-Adad, J., Vavasour, I., Churchill, N., Guenette, M., Chopra, A., Adelia, A., Hernandez-Torres, E., Traboulsee, A., Kolind, S., Schweizer, T., & Oh, J. (2023, February). Myelin Abnormalities in the Cervical Spinal Cord is Associated with Clinical Disability Across MS Subtypes [Abstract]. ACTRIMS Forum, San Diego, CA, USA. Published in Multiple Sclerosis Journal, 29(2 suppl). External link
Laine Medina, N. J., Gros, C., Cohen-Adad, J., Le Troter, A., & Callot, V. (2022, May). A multiclass deep-learning model with realistic data augmentation for improved 7T gray matter/spinal cord segmentation on patients and controls [Presentation]. In Joint annual Meeting ISMRM ESMRMB ISMRT, London, UK. External link
Lemay, A., Gros, C., Zhuo, Z., Zhang, J., Duan, Y., Cohen-Adad, J., & Liu, Y. (2021). Automatic multiclass intramedullary spinal cord tumor segmentation on MRI with deep learning. NeuroImage - Clinical, 31, 9 pages. Available
Lemay, A., Gros, C., Vincent, O., Liu, Y., Cohen, J. P., & Cohen-Adad, J. (2021, July). Benefits of linear conditioning for segmentation using metadata [Paper]. 4th Conference on Medical Imaging with Deep Learning (CMDL 2021), Lubeck, Germany. External link
Lemay, A., Gros, C., Vincent, O., Liu, Y., Cohen, J. P., & Cohen-Adad, J. (2021, July). Benefits of Linear Conditioning with Metadata for Image Segmentation [Presentation]. In 4th Conference on Medical Imaging with Deep Learning (MIDL 2021). Published in Proceedings of Machine Learning Research, 143. External link
Lousada, E., Boudreau, M., Cohen-Adad, J., Oumesmar, B. N., Burguiere, E., & Schreiweis, C. (2021). Reduced Axon Calibre in the Associative Striatum of the Sapap3 Knockout Mouse. Brain Sciences, 11(10), 1353 (16 pages). External link
Labounek, R., Valošek, J., Horák, T., Svátková, A., Bednařík, P., Vojtíšek, L., Horáková, M., Nestrašil, I., Lenglet, C., Cohen-Adad, J., Bednařík, J., & Hluštík, P. (2020). HARDI-ZOOMit protocol improves specificity to microstructural changes in presymptomatic myelopathy. Scientific Reports, 10(1), 17529 (19 pages). Available
Lemay, A., Gros, C., Zhuo, Z., Duan, Y., Zhang, J., Cohen-Adad, J., & Liu, Y. (2020, June). Spinal cord tumor segmentation using multimodal deep learning approach [Paper]. 26th OHBM annual meeting. Unavailable
Lousada, E., Boudreau, M., Perone, C., Cohen-Adad, J., Nait-Oumesmar, B., Schreiweis, C., & Burguière, E. (2019, April). Characterization of cortico-striatal myelination in the cortex of pathological repetitive behaviors [Abstract]. 13th IBAGS Meeting, Biarritz, France. Unavailable
Lopez Rios, N., Topfer, R., Foias, A., Guittonneau, A., Gilbert, K. M., Menon, R. S., Wald, L. L., Stockmann, J. P., & Cohen-Adad, J. (2019, May). Integrated AC/DC coil dipole Tx array for 7T MRI of the spinal cord [Poster]. ISMRM 27th Annual Meeting & Exhibition, Montréal, QC, Canada. External link
Labounek, R., Valošek, J., Horák, T., Bednařík, P., Hok, P., Kudlička, P., Horáková, M., Kočica, J., Lenglet, C., Cohen-Adad, J., Nestrašil, I., Bednařík, J., & Hluštík, P. (2019, May). Novel HARDI-ZOOMit protocol detects changes in spinal cord microstructure in patients with asymptomatic non-myelopathic degenerative cervical spinal cord compression [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
Lee, L. E., Ljungberg, E., Shin, D., Figley, C. R., Vavasour, I. M., Rauscher, A., Cohen-Adad, J., Li, D. K. B., Traboulsee, A. L., MacKay, A. L., Lee, J., & Kolind, S. H. (2018). Inter-vendor reproducibility of myelin water imaging using a 3D gradient and spin echo sequence. Frontiers in Neuroscience, 12, 854 (8 pages). Available
Lopez Rios, N., Pouliot, P., Papoutsis, K., Foias, A., Stikov, N., Lesage, F., Dehaes, M., & Cohen-Adad, J. (2018). Design and construction of an optimized transmit/receive hybrid birdcage resonator to improve full body images of medium-sized animals in 7T scanner. PLOS One, 13(2), e0192035 (14 pages). Available
Lévy, S., Guertin, M.-C., Khatibi, A., Mezer, A., Martinu, K., Chen, J. I., Stikov, N., Rainville, P., & Cohen-Adad, J. (2018). Test-retest reliability of myelin imaging in the human spinal cord: Measurement errors versus region- and aging-induced variations. PLOS One, 13(1), e0189944 (25 pages). Available
Lévy, S., Guertin, M.-C., Khatibi, A., Mezer, A., Martinu, K., Chen, J. I., Stikov, N., Rainville, P., & Cohen-Adad, J. (2018). Correction: Test-retest reliability of myelin imaging in the human spinal cord: Measurement errors versus region- and aging-induced variations. PLOS ONE, 13(6), e0199796. External link
Lubrano di Scandalea, M., Perone, C. S., & Cohen-Adad, J. (2018, December). Deep active learning for myelin segmentation of histology data [Presentation]. In 2nd Montréal Artificial Intelligence and Neuroscience Conference (MAIN 2018), Montréal, Qc, Canada. Unavailable
Lopez Rios, N., Foias, A., Lodygensky, G., Dehaes, M., & Cohen-Adad, J. (2018). Size-adaptable 13-channel receive array for brain MRI in human neonates at 3T. NMR in Biomedicine, 31(8), 12 pages. External link
Ljungberg, E., Cohen-Adad, J., Eunyoung Lee, L., Rauscher, A., Li, D., Traboulsee, A., Mackay, A., Figley, C., Lee, J., & Kolind, S. (2017, April). Making Myelin Water Imaging Mainstream: Multi-site and Multi-vendor Reproducibility [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Lopez Rios, N., Foias, A., Lodygensky, G. A., Stikov, N., Dehaes, M., & Cohen-Adad, J. (2017, April). Size-adaptable 13-channel receive array for brain imaging in human neonates at 3T. [Poster]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Lévy, S., Khatibi, A., Mangeat, G., Chen, J.-I., Martinu, K., Rainville, P., Stikov, N., & Cohen-Adad, J. (2017, April). Statistical combinations of T1, MTR, Mtsat and macromolecular tissue volume to improve myelin content estimation in the human spinal cord at 3T [Poster]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Louapré, C., Govindarajan, S. T., Gianni, C., Cohen-Adad, J., Gregory, M. D., Nielsen, A. S., Madigan, N., Sloane, J. A., Kinkel, R. P., & Mainero, C. (2016). Is the Relationship between Cortical and White Matter Pathologic Changes in Multiple Sclerosis Spatially Specific? A Multimodal 7-T and 3-T MR Imaging Study with Surface and Tract-based Analysis. Radiology, 278(2), 524-35. External link
Liu, W., Bhat, H., Cohen-Adad, J., Setsompop, K., Wang, D., Beck, T., Cauley, S. F., Zhou, K., & Porter, D. A. (2015, May). Large-FOV Tractography of the Brain and Spinal Cord with Reduced Scan Time: A Study using Diffusion-Weighted, Readout-Segmented EPI and Simultaneous Multi-Slice Acceleration [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
Lévy, S., Benhamou, M., Naaman, C., Rainville, P., Callot, V., & Cohen-Adad, J. (2015). White matter atlas of the human spinal cord with estimation of partial volume effect. NeuroImage, 119, 262-271. External link
Louapre, C., Govindarajan, S. T., Gianni, C., Cohen-Adad, J., Kinkel, R. P., & Mainero, C. (2014, September). Exploring the link between resting-state functional connectivity in the default mode network and subpial pathology in MS using multimodal 7 Tesla MRI [Paper]. ACTRIMS-ECTRIMS conference (MS Boston 2014), Boston, Mass.. Unavailable
Louapré, C., Govindarajan, S. T., Gianni, C., Cohen-Adad, J., Tobyne, S., Kinkel, R. P., & Mainero, C. (2014, April). Intracortical laminar pathology in the motor cortex is associated with tractographically connected white matter injury in multiple sclerosis : a multimodal 7T and 3T MRI study [Paper]. 66th Annual Meeting of American Academy of Neurology, Philadelphia, USA. Published in Neurology, 82(10_supplem). External link
Lundell, H., Barthelemy, D., Biering-Sørensen, F., Cohen-Adad, J., Nielsen, J. B., & Dyrby, T. B. (2013). Fast diffusion tensor imaging and tractography of the whole cervical spinal cord using point spread function corrected echo planar imaging. Magnetic Resonance in Medecine, 69(1), 144-149. External link
Louapré, C., Govindarajan, S. T., Gianni, C., Cohen-Adad, J., Tobyne, S., Kinkel, R. P., & Mainero, C. (2013, October). Intracortical laminar pathology in the motor cortex is associated with proximal underlying white matter injury in multiple sclerosis: a multimodal 7 T and 3T MRI study [Paper]. 29th Congress of the european Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS 2013), Copenhagen, Denmark. Unavailable
Lundell, H., & Cohen-Adad, J. (2009, April). Point spread function mapping for distortion correction of spinal cord diffusion weighted MRI [Paper]. 17th ISMRM annual meeting and exhibition, Honolulu, Hawaii. External link
McGinnis, J., Karthik, E. N., Rühling, S., Wurm, R., Stern, K., Bédard, S., Wiltgen, T., Berthele, A., Zimmer, C., Hemmer, B., Benedikt, W., Rückert, D., Kirschke, J., Cohen-Adad, J., & Mühlau, M. (2023, October). Towards generalizable spinal cord lesion segmentation in multiple sclerosis [Poster]. 9th Joint ECTRIMS-ACTRIMS meeting (MSMilan 2023), Milan, Italy (1 page). Published in Multiple Sclerosis Journal, 29(3S). External link
Mancini, M., Karakuzu, A., Cohen-Adad, J., Cercignani, M., Nichols, T., & Stikov, N. (2022). An interactive meta-analysis of MRI biomarkers of myelin [Dataset]. External link
McLachlin, S., Leung, J., Sivan, V., Quirion, P.-O., Wilkie, P., Cohen-Adad, J., Whyne, C. M., & Hardisty, M. R. (2021). Spatial correspondence of spinal cord white matter tracts using diffusion tensor imaging, fibre tractography, and atlas-based segmentation. Neuroradiology, 63(3), 373-380. External link
Mancini, M., Karakuzu, A., Cohen-Adad, J., Cercignani, M., Nichols, T. E., & Stikov, N. (2020). Author response: An interactive meta-analysis of MRI biomarkers of myelin. eLife, 9, e61523 (23 pages). External link
Mummaneni, N., Burke, J. F., DiGiorgio, A. M., Thomas, L. H., Duong-Fernandez, X., Harris, M., Pascual, L. U., Ferguson, A. R., Huie, J. R., Pan, J. Z., Hemmerle, D. D., Singh, V., Torres-Espin, A., Omondi, C., Kyritsis, N., Weinstein, P. R., Wheatstone, W. D., Manley, G. T., Bresnahan, J. C., ... Talbott, J. F. (2020). Injury volume extracted from MRI predicts neurologic outcome in acute spinal cord injury: A prospective TRACK-SCI pilot study. Journal of Clinical Neuroscience, 82, 231-236. External link
Mancini, M., Karakuzu, A., Cohen-Adad, J., Cercignani, M., Nichols, T. E., & Stikov, N. (2020). An interactive meta-analysis of MRI biomarkers of myelin. Elife, 9, e61523 (23 pages). External link
Mangeat, G., Ouellette, R., Wabartha, M., De Leener, B., Plattén, M., Karrenbauer, V. D., Warntjes, M., Stikov, N., Mainero, C., Cohen-Adad, J., & Granberg, T. (2020). Machine Learning and Multiparametric Brain MRI to Differentiate Hereditary Diffuse Leukodystrophy with Spheroids from Multiple Sclerosis. Journal of Neuroimaging, 30(5), 674-682. External link
Mancini, M., Alonso Ortiz, E., Cercignani, M., Cohen-Adad, J., & Stikov, N. (2020, August). Myelin-sensitive quantitative maps : two's company, three's a crowd? [Paper]. ISMRM & SMRT annual Meeting & Exhibition (ISMRM 2020). External link
Mangeat, G., Ouellette, R., Platten, M., Petersson, S., Van Loo, H., Badji, A., Stikov, N., Cohen-Adad, J., & Granberg, T. (2020, June). Repeatability and reproducibility of quantitative synthetic MRI across vendors and field strengths [Paper]. 26th OHBM annual meeting. Unavailable
McCoy, D. B., Dupont, S. M., Gros, C., Cohen-Adad, J., Huie, R. J., Ferguson, A., Duong-Fernandez, X., Thomas, L. H., Singh, V., Narvid, J., Pascual, L., Kyritsis, N., Beattie, M. S., Bresnahan, J. C., Dhall, S., Whetstone, W., Talbott, J. F., & Investigators, T.-S. (2019). Convolutional Neural Network-Based Automated Segmentation of the Spinal Cord and Contusion Injury: Deep Learning Biomarker Correlates of Motor Impairment in Acute Spinal Cord Injury. American Journal of Neuroradiology, 40(4), 737-744. External link
Mangeat, G., Nami, H., Pinon, N., Foias, A., Stikov, N., Granberg, T., & Cohen-Adad, J. (2019, May). Stain-free histology to validate quantitative MRI [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, QC, Canada. External link
Martin, A. R., De Leener, B., Cohen-Adad, J., Kalsi-Ryan, S., Cadotte, D. W., Wilson, J. R., Tétreault, L., Nouri, A., Crawley, A., Mikulis, D. J., Ginsberg, H., Massicotte, E. M., & Fehlings, M. G. (2018). Monitoring for myelopathic progression with multiparametric quantitative MRI. PLOS One, 13(4), e0195733 (17 pages). Available
Martin, A. R., De Leener, B., Cohen-Adad, J., Cadotte, D. W., Nouri, A., Wilson, J. R., Tétreault, L., Crawley, A. P., Mikulis, D. J., Ginsberg, H., & Fehlings, M. G. (2018). Can microstructural MRI detect subclinical tissue injury in subjects with asymptomatic cervical spinal cord compression? A prospective cohort study. BMJ Open, 8(4), e019809 (11 pages). Available
Mangeat, G., Ouellette, R., Warntjes, M., Plattén, M., Engström Nordin, L., Stikov, N., Granberg, T., & Cohen-Adad, J. (2018, June). Accuracy and precision of synthetic MRI [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Mangeat, G., Badji, A., Ouellette, R., Treaba, C. A., Herranz, E., Granberg, T., Louapre, C., Stikov, N., Sloane, J. A., Bellec, P., Mainero, C., & Cohen-Adad, J. (2018). Changes in structural network are associated with cortical demyelination in early multiple sclerosis. Human Brain Mapping, 39(5), 2133-2146. External link
McCoy, D. B., Dupont, S. M., Gros, C., Narvid, J., Cohen-Adad, J., & Talbot, J. F. (2018, June). Convolutional neural network based segmentation of the spinal cord and intramedullary injury in acute blunt spinal cor trauma [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Morozov, D., Lopez Rios, N., Duval, T., Foias, A., & Cohen-Adad, J. (2018). Effect of cardiac-related translational motion in diffusion MRI of the spinal cord. Magnetic Resonance Imaging, 50, 119-124. External link
Mangeat, G., Ouellette, R., Wabartha, M., Karrenbauer, V. D., Stikov, N., Warntjes, M., Mainero, C., Cohen-Adad, J., & Granberg, T. (2018, June). Machine learning and rapid multi-parametric relaxometry can differentiate demyelinating disorders with high accuracy [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Mingasson, T., Duval, T., Stikov, N., & Cohen-Adad, J. (2017). AxonPacking: an open-source software to simulate arrangements of axons in white matter. Frontiers in Neuroinformatics, 11, 1-12. Available
Martin, A. R., De Leener, B., Cohen-Adad, J., Cadotte, D. W., Kalsi-Ryan, S., Lange, S. F., Tetreault, L., Nouri, A., Crawley, A., Mikulis, D. J., Ginsberg, H., & Fehlings, M. G. (2017). Clinically Feasible Microstructural MRI to Quantify Cervical Spinal Cord Tissue Injury Using DTI, MT, and T2*-Weighted Imaging: Assessment of Normative Data and Reliability. American Journal of Neuroradiology, 38(6), 1257-1265. External link
Mangeat, G., De Leener, B., Karrenbauer, V. D., Warntjes, M., Stikov, N., Mainero, C., Cohen-Adad, J., & Granberg, T. (2017, April). Fast multivariate relaxometry can differentiate neurodegenerative disease processes and phenotypes [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
McCoy, D. B., Talbott, J. F., Wilson, M., Mamlouk, M. D., Cohen-Adad, J., Wilson, M., & Narvid, J. (2017). MRI Atlas-Based Measurement of Spinal Cord Injury Predicts Outcome in Acute Flaccid Myelitis. American Journal of Neuroradiology, 38(2), 410-417. External link
Martin, A. R., De Leener, B., Cohen-Adad, J., Cadotte, D. W., Wilson, J. R., Tétreault, L., Lange, S. F., Nouri, A., Crawley, A., Mikulis, D. J., Ginsberg, H., & Fehlings, M. G. (2017, April). Multi-Parametric Cervical Spinal Cord MRI Provides An Accurate Diagnostic Tool for Detecting Clinical Myelopathy [Presentation]. In ISMR 25th annual meeting and Exhibition, Honolulu, HI, USA. External link
Martin, A. R., De Leener, B., Cohen-Adad, J., Cadotte, D. W., Wilson, J. R., Tétreault, L., Nouri, A., Crawley, A., Mikulis, D. J., Ginsberg, H., & Fehlings, M. G. (2017, April). Multi-parametric spinal cord MRI detects subclinical tissue injury in asymptomatic cervical spinal cord compression [Poster]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Martin, A. R., De Leener, B., Cohen-Adad, J., Cadotte, D. W., Kalsi-Ryan, S., Lange, S. F., Tetreault, L., Nouri, A., Crawley, A., Mikulis, D. J., Ginsberg, H., & Fehlings, M. G. (2017). A Novel MRI Biomarker of Spinal Cord White Matter Injury: T2*-Weighted White Matter to Gray Matter Signal Intensity Ratio. American Journal of Neuroradiology, 38(6), 1266-1273. External link
Martin, A. R., De Leener, B., Cohen-Adad, J., Cadotte, D. W., Kalsi-Ryan, S., Wilson, J. R., Tétreault, L., Nouri, A., Crawley, A., Mikulis, D. J., Ginsberg, H., & Fehlings, M. G. (2017, April). Toward clinical translation of quantitative spinal cord MRI : serial monitoring to identify disease progression in patients with degenerative cervical myelophaty [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Mangeat, G., Ouellette, R., Treaba, C. A., Granberg, T., Louapre, C., Stikov, N., Sloane, J. A., Klawiter, E., Mainero, C., & Cohen-Adad, J. (2016, May). Association between cortical demyelination and structural connectomics in early multiple sclerosis [Presentation]. In ISMR 24th annual Meeting and Exhibition, Singapore. External link
Martin, A., De Leener, B., Cohen-Adad, J., Aleksanderek, I., Cadotte, D., Crawley, A., Ginsberg, H., Mikulis, D., & Fehlings, M. (2016, June). Clinically Feasible Microstructural MRI to Assess Cervical Spinal Cord Tissue Injury: Methods, Normative data, and Reliability [Abstract]. 34th Annual National Neurotrauma Symposium, Lexington, Kentucky. Published in Journal of Neurotrauma, 33(13). External link
Martin, A. R., De Leener, B., Cohen-Adad, J., Aleksanderek, I., Cadotte, D. W., & Fehlings, M. G. (2016, October). A clinically feasible quantitative MRI protocol to assess tissue injury in the cervical spinal cord using DTI, MT, and T2*-weighted imaging : reliability and variations with confounding variables [Paper]. 31st NASS annual meeting, Boston, Massachusetts. External link
Martin, A., De Leener, B., Cohen-Adad, J., Aleksanderek, I., Cadotte, D., Kalsi-Ryan, S., Tétreault, L., Crawley, A., Ginsberg, H., Mikulis, D., & Fehlings, M. (2016, June). Microstructural Cervical Spinal Cord MRI Quantifies Tract-Specific Injury and Correlates with Global and Focal Deficits [Abstract]. 34th Annual National Neurotrauma Symposium, Lexington, Kentucky. Published in Journal of Neurotrauma, 33(13). External link
Martin, A. R., De Leener, B., Cohen-Adad, J., Aleksanderek, I., Cadotte, D. W., Kalsi-Ryan, S., Tétreault, L., Crawley, A., Ginsberg, H. J., & Fehlings, M. G. (2016). Microstructural MRI Quantifies Tract-Specific Injury and Correlates With Global Disability and Focal Neurological Deficits in Degenerative Cervical Myelopathy. Neurosurgery, 63(CN_suppl_1), 165-165. External link
Martin, A. R., De Leener, B., Aleksanderek, I., Cohen-Adad, J., Cadotte, D. W., Kalsi-Ryan, S., Tétreault, L., Crawley, A. P., Ginsberg, H., Mikulis, D., & Fehlings, M. G. (2016, May). A Prospective Longitudinal Study in Degenerative Cervical Myelopathy Using Quantitative Microstructural MRI with Tract-Specific Metrics [Poster]. 24th Annual Meeting of ISMRM, Singapore. External link
Martin, A. R., Aleksanderek, I., Cohen-Adad, J., Tarmohamed, Z., Tétreault, L., Smith, N., Cadotte, D. W., Crawley, A., Ginsberg, H., Milukis, D. J., & Fehlings, M. G. (2016, May). Translating state-of-art spinal cord MRI techniques to clinical use : a systematic review of clinical studies utilizing DTI, MT, MWF, MRS and fMRI [Presentation]. In ISMR 24th annual meeting and Exhibition, Singapore. External link
Mainero, C., Louapre, C., Govindarajan, S. T., Gianni, C., Nielsen, A. S., Cohen-Adad, J., Sloane, J., & Kinkel, R. P. (2015). A gradient in cortical pathology in multiple sclerosis by in vivo quantitative 7 T imaging. Brain, 138(4), 932-945. External link
Mangeat, G., Govindarajan, S. T., Kinkel, R. P., Mainero, C., & Cohen-Adad, J. (2015, May). Multivariate combination of magnetization transfer ratio and quantitative T2* to detect subpial demyelination in multiple sclerosis [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
Mangeat, G., Govindarajan, S. T., Maineroc, C., & Cohen-Adad, J. (2015). Multivariate combination of magnetization transfer, T-2* and B0 orientation to study the myelo-architecture of the in vivo human cortex. NeuroImage, 119, 89-102. External link
Mangeat, G., Louapre, C., Herranz, E., Treaba, C. A., Ouellette, R., Sloane, J. A., Klawiter, E. C., Cohen-Adad, J., & Mainero, C. (2015). Multivariate combination of quantitative T-2* and T-1 at 7T MRI detects in vivo subpial demyelination in the early stages of MS. Multiple Sclerosis Journal, 21(11_suppl), 485-485. External link
Mangeat, G., Louapre, C., Herranz, E. T., Reaba, C., Ouellette, R., Sloane, J. A., Klawiter, E. C., Cohen-Adad, J., & Mainero, C. (2015, October). Multivariate combination of quantitative T2* and T1 at 7T MRI detects in vivo subpial demyelination in the early stages of MS [Paper]. 31st Congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS 2015), Barcelona, Spain. Unavailable
Martin, A. R., Aleksanderek, I., Cohen-Adad, J., Cadotte, D. W., Kalsi-Ryan, S., Nugaeva, N., De Leener, B., Mikulis, D. J., Crawley, A. P., Ginsberg, H., & Fehlings, M. G. (2015, March). Next-generation MRI of the human spinal cord : quantitative imaging biomarkers for cervical spondylotic myelopathy (CSM) [Paper]. 13th Imaging Network Ontario Symposium (IMNO 2015), London, Ontario. Unavailable
Martin, A. R., Aleksanderek, I., Cohen-Adad, J., Cadotte, D. W., Kalsi-Ryan, S., Nugaeva, N., De Leener, B., Mikulis, D., Crawley, A. P., Ginsberg, H., & Fehlings, M. G. (2015, September). Next-Generation MRI of the Human Spinal Cord: Quantitative Imaging Biomarkers for Cervical Spondylotic Myelopathy (CSM) [Paper]. 31th Annual Meeting of The Congress of Neurological Surgeons, New Orleans, Louisiana, USA. Unavailable
Martin, A. R., Aleksanderek, I., Cohen-Adad, J., Cadotte, D. W., Kalsi-Ryan, S., Nugaeva, N., Mikulis, D. J., Crawley, A., Ginsberg, H., & Fehlings, M. G. (2015, March). Next-generation MRI of the human spinal cord: Translating measures of microarchitecture and function to clinical utilization [Paper]. 13th Imaging Network Ontario Symposium, London, Ontario, Canada. External link
Martin, A. R., Aleksanderek, I., Cohen-Adad, J., Tarmohamed, Z., Tétreault, L., Smith, N., Cadotte, D. W., Crawley, A., Ginsberg, H., Mikulis, D. J., & Fehlings, M. G. (2015). Translating state-of-the-art spinal cord MRI techniques to clinical use: A systematic review of clinical studies utilizing DTI, MT, MWF, MRS, and fMRI. NeuroImage - Clinical, 10, 192-238. Available
Mangeat, G., Govindarajan, S. T., Mainero, C., & Cohen-Adad, J. (2014, May). Comparison between 7T T2* and 3T MTR in the in vivo human cortex [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
Mainero, C., Govindarajan, S. T., Kinkel, P., Nielsen, A. S., & Cohen-Adad, J. (2013, April). A gradient in cortical T2*relaxation decay changes at 7 Telsa MRI in patients with multiple sclerosis [Paper]. ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. External link
McNab, J. A., Edlow, B. L., Witzel, T., Huang, S. Y., Bhat, H., Heberlein, K., Feiweier, T., Liu, K., Keil, B., Cohen-Adad, J., Tisdall, M. D., Folkerth, R. D., Kinney, H. C., & Wald, L. L. (2013). The human connectome project and beyond: Initial applications of 300 Mt/M gradients. NeuroImage, 80, 234-245. External link
Mangeat, G., Govindarajan, S., Kinkel, R. P., Mainero, C., & Cohen-Adad, J. (2013, October). MTR and T2* analysis of subpial demyelination [Paper]. 29th congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS), Copenhagen, Denmark. External link
McNab, J. A., Witzel, T., Bhat, H., Heberlein, K., Keil, B., Cohen-Adad, J., Tisdall, M. D., & Wald, L. L. (2012, May). In vivo human brain measurements of axon diameter distributions in the corpus callosum using 300 mT/m maximum gradient strengths [Paper]. 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. External link
McNab, J. A., Witzel, T., Bhat, H., Heberlein, K., Cohen-Adad, J., Tisdall, M. D., & Wald, L. L. (2012, June). In vivo human brain measurements of axon diameter using 300 mT/m maximum gradient strengths [Paper]. 18th Annual Meeting of the Organization for Human Brain Mapping (OHBM), Beijing, Chine. External link
Mareyam, A., Cohen-Adad, J., Blau, J. N., Polimeni, J. R., Keil, B., & Wald, L. L. (2010, May). A 32 cannel receive-only 3T array optimized for brain and cervical spine imaging [Paper]. 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. External link
Mainero, C., Lima, C. S., Cohen-Adad, J., Greve, D. N., Benner, T., Radding, A., Kinkel, R., Fischl, B., & Rosen, B. (2010, May). Evidence of distributed subpial T2* signal changes at 7T in multiple sclerosis : an histogram based approach [Paper]. 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. External link
McNab, J. A., Polimeni, J. R., Cohen-Adad, J., & Wald, L. L. (2010, May). Improving sensitivity in low SNR diffusion imaging using optimal SNR coil combinations [Paper]. 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. External link
Mainero, C., Cohen-Adad, J., Greve, D. N., Benner, T., Radding, A., Fischl, B., Kinkel, R. P., & Rosen, B. R. (2009, June). Subpial pathology as a substrate for cortical thinning in multiple sclerosis : a 7T MRI study [Paper]. 16th OHBM annual meeting, Barcelona, Spain. Unavailable
Macini-Marie, A., Cohen-Adad, J., Jimenez, J., Corcoran, C., Rainville, P., Stip, E., Potvin, S., & Mendrek, A. (2009, March). Sex differences in corpus callosum fractional anisotropy in schizophrenia patients : a pilot tractography study using diffusion tensor imaging [Paper]. 12th International Congress on Schizophrenia Research (ICOSR 2009), San Diego, California. Unavailable
Nami, H., Perone, C. S., & Cohen-Adad, J. (2022). Histology-informed automatic parcellation of white matter tracts in the rat spinal cord. Frontiers in Neuroanatomy, 16, 960475 (12 pages). External link
Nestrasil, I., Labounek, R., Nguyen, C., Krasovec, I., Valošek, J., Svatkova, A., Cohen-Adad, J., Lenglet, C., & Whitley, C. (2020, February). Intraspinal space restriction at the occipito-cervical junction alters cervical spinal cord diffusion MRI metrics in mucopolysacharidoses patients [Abstract]. 16th Annual Research Meeting of the WORLDSymposium, Orlando, Florida. Published in Molecular Genetics and Metabolism, 129(2). External link
Nestrasil, I., Labounek, R., Nguyen, C., Krasovec, I., Valošek, J., Svatkova, A., Cohen-Adad, J., Lenglet, C., & Whitley, C. (2019, May). Cervical spinal cord diffusion MRI and intraspinal space restriction at the occipito-cervical junction in mucopolysacharidoses patients [Poster]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
Nami, H., Saliani, A., Zaimi, A., Duval, T., Perone, C., Stikov, N., & Cohen-Adad, J. (2019, May). Construction of a quantifiable rat spinal cord atlas and tract delineation using agglomerative clustering [Poster]. ISMRM 27th Annual Meeting & Exhibition, Montréal, QC, Canada. External link
Ning, L., Duval, T., Cohen-Adad, J., & Rathi, Y. (2017, April). Histological validation of microstructural measures derived for the PICASSO model [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Unavailable
Nielsen, A. S., Kinkel, R. P., Tinelli, E., Benner, T., Cohen-Adad, J., & Mainero, C. (2012). Focal cortical lesion detection in multiple sclerosis: 3 tesla DIR versus 7 tesla FLASH-T2*. JMRI, 35(3), 537-542. External link
Ost, K., Jacobs, W. B., Evaniew, N., Cohen-Adad, J., Anderson, D., & Cadotte, D. W. (2021). Spinal cord morphology in degenerative cervical myelopathy patients ; assessing key morphological characteristics using Mmchine vision tools. Journal of Clinical Medicine, 10(4), 18 pages. Available
Ouellette, R., Mangeat, G., Polyak, I., Warntjes, M., Forslin, Y., Bergendal, Å., Plattén, M., Uppman, M., Treaba, C. A., Cohen-Adad, J., Piehl, F., Kristoffersen Wiberg, M., Fredrikson, S., Mainero, C., & Granberg, T. (2020). Validation of rapid magnetic resonance myelin imaging in multiple sclerosis. Movement Disorders, 87(5), 710-724. Available
Ouellette, R., Treaba, C. A., Granberg, T., Herranz, E., Barletta, V., Mehndiratta, A., De Leener, B., Tauhid, S., Yousuf, F., Dupont, S. M., Klawiter, E. C., Sloane, J. A., Bakshi, R., Cohen-Adad, J., & Mainero, C. (2020). 7 T imaging reveals a gradient in spinal cord lesion distribution in multiple sclerosis. Brain, 143(10), 2973-2987. External link
Ouellette, R., Treaba, C. A., Granberg, T., Herranz, E., Barletta, V., Mehndiratta, A., De Leener, B., Tauhid, S., Yousuf, F., Dupont, S., Klawiter, E. C., Sloane, J. A., Bakshi, R., Cohen-Adad, J., & Mainero, C. (2019, September). Characterization of outer and inner spinal cord pathology in multiple sclerosis by 7 Tesla imaging [Abstract]. 35th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS) and 24th Annual Conference of Rehabilitation in MS, Stockholm, Sweden. Published in Multiple Sclerosis Journal, 25(2_suppl). External link
Ouellette, R., Treaba, C. A., Granberg, T., Barletta, V., Herranz E, T., Mangeat, G., Mehndiratta, A., Tauhid, S., Yousuf, F., De Leener, B., Dupont, S., Sloane, J. A., Bakshi, R., Cohen-Adad, J., & Mainero, C. (2018, October). Characterization of multiple sclerosis grey and white matter pathology in the brain and spinal cord at 7 Tesla MRI [Poster]. 34th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS 2018), Berlin, Germany. Published in Multiple Sclerosis Journal, 24(2). External link
Ouellette, R., Treaba, C. A., Granberg, T., Barletta, V., Herranz, E., Mangeat, G., Mehndiratta, A., Tauhid, S., Yousuf, F., De Leener, B., Dupont, S., Sloane, J. A., Bakshi, R., Cohen-Adad, J., & Mainero, C. (2018, October). Characterization of multiple sclerosis grey and white matter pathology in the brain and spinar cord at 7 Tesla MRI [Paper]. 34th congress of the European Committee for Treatment and Research in Multiple Sclerosis, Berlin, Germany. Unavailable
Ouellette, R., Warntjes, M., Forslin, Y., Bergendal, A., Polyak, I., Mangeat, G., Platten, M., Uppman, M., Cohen-Adad, J., Piehl, F., Wiberg, M. K., Fredrikson, S., Mainero, C., & Granberg, T. (2018, October). Clinical and histological validation of rapid magnetic resonance myelin imaging in multiple sclerosis [Poster]. 34th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS 2018), Berlin, Germany. Published in Multiple Sclerosis Journal, 24(2). External link
Ouellette, R., Granberg, T., Treaba, C. A., Herranz, E., De Leener, B., Sloane, J. A., Tauhid, S., Yousuf, F., Dupont, S. M., Klawiter, E. C., Bakshi, R., Cohen-Adad, J., & Mainero, C. (2017). In vivo characterization of grey and white matter spinal cord pathology in multiple sclerosis using ultra high field MRI (P4.365). Neurology, 88(16_supplem). External link
Ouellette, R., Treaba, C. A., Granberg, T., Herranz, E., Barletta, V., De Leener, B., Tauhid, S., Yousuf, F., Dupont, S., Klawiter, E. C., Sloane, J. A., Bakshi, R., Cohen-Adad, J., & Mainero, C. (2017, October). Characterization of spinal cord pathology and its correlates at ultra-high field MRI [Paper]. 7th Joint European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS)-Americas-Committee-for-Treatment-and-Research-in-Multiple-Scle rosis (ACTRIMS), Paris, France. Published in Multiple Sclerosis Journal, 23(3_suppl). External link
Onu, M., Gervai, P., Cohen-Adad, J., Lawrence, J., Kornelsen, J., Tomanek, B., & Sboto-Frankenstein, U. N. (2010). Human cervical spinal cord funiculi: Investigation with magnetic resonance diffusion tensor imaging. JMRI, 31(4), 829-837. External link
Papp, D., Gilbert, K. M., Cereza, G., D'Astous, A., Lopez-Rios, N., Boudreau, M., Couch, M. J., Yazdanbakhsh, P., Barry, R. L., Alonso Ortiz, E., & Cohen-Adad, J. (2024). RF shimming in the cervical spinal cord at 7T. Magnetic Resonance in Medicine, 30225 (12 pages). Available
Poldrack, R. A., Markiewicz, C. J., Appelhoff, S., Ashar, Y. K., Auer, T., Baillet, S., Bansal, S., Beltrachini, L., Benar, C. G., Bertazzoli, G., Bhogawar, S., Blair, R. W., Bortoletto, M., Boudreau, M., Brooks, T. L., Calhoun, V. D., Castelli, F. M., Clement, P., Cohen, A. L., ... Gorgolewski, K. J. (2024). The past, present, and future of the brain imaging data structure (BIDS). Imaging Neuroscience, 2, 00103 (19 pages). External link
Papp, D., Cereza, G., D'Astous, A., Alonso Ortiz, E., & Cohen-Adad, J. (2023, June). RF shimming in the spinal cord at 7T [Presentation]. In ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Papp, D., Boulant, N., Massire, A., Mauconduit, F., Gras, V., & Cohen-Adad, J. (2023, June). Universal pulses for the cervical spinal cord at 7T : a feasibility study [Presentation]. In ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Papp, D., D'Astous, A., Cohen-Adad, J., & Alonso Ortiz, E. (2022, May). Realtime dynamic xyz-shimming in the cervical spinal cord [Poster]. 2022 Joint annual meeting ISMRM-ESMRMB & ISMRT 31st annual meeting, London, England. External link
Paugam, F., Lefeuvre, J., Perone, C. S., Gros, C., Reich, D. S., Sati, P., & Cohen-Adad, J. (2019). Open-source pipeline for multi-class segmentation of the spinal cord with deep learning. Magnetic Resonance Imaging, 64, 21-27. External link
Perone, C. S., Ballester, P., Barros, R. C., & Cohen-Adad, J. (2019). Unsupervised domain adaptation for medical imaging segmentation with self-ensembling. NeuroImage, 194, 1-11. External link
Perone, C. S., Calabrese, E., & Cohen-Adad, J. (2018). Spinal cord gray matter segmentation using deep dilated convolutions. Scientific Reports, 8(1), 5966 (13 pages). Available
Perone, C. S., & Cohen-Adad, J. (2018, September). Deep semi-supervised segmentation with weight-averaged consistency targets [Paper]. 4th International Workshop on Deep Learning in Medical Image Analysis (DLMIA 2018) and 8th International Workshop on Multimodal Learning for Clinical Decision Support (ML-CDS 2018), Granada, Spain. External link
Paquin, M.-Ê., El Mendili, M. M., Gros, C., Dupont, S. M., Cohen-Adad, J., & Pradat, P. F. (2018). Spinal Cord Gray Matter Atrophy in Amyotrophic Lateral Sclerosis. American Journal of Neuroradiology, 39(1), 184-192. External link
Perdigon Romero, F., David, J. P., & Cohen-Adad, J. (2018, August). Vertebral labeling on MRI using deep learning techniques [Abstract]. NeuroInformatics 2018, Montréal, Qc, Canada. External link
Porisky, A., Brosch, T., Ljungberg, E., Tang, L. Y. W., Yoo, Y., De Leener, B., Traboulsee, A., Cohen-Adad, J., & Tam, R. (2017, September). Grey matter segmentation in spinal cord mris via 3D convolutional encoder networks with shortcut connections [Paper]. 3rd International Workshop on Deep Learning in Medical Image Analysis (DLMIA 2017) and 7th International Workshop on Multimodal Learning for Clinical Decision Support (ML-CDS 2017) held in Conjunction with 20th International Conference on Medical Image Co, Québec City, QC, Canada. External link
Prados, F., Ashburner, J., Blaiotta, C., Brosch, T., Carballido-Gamio, J., Cardoso, M. J., Conrad, B. N., Datta, E., David, G., De Leener, B., Dupont, S. M., Freund, P., Wheeler-Kingshott, C. A. M. G., Grussu, F., Henry, R., Landman, B. A., Ljungberg, E., Lyttle, B., Ourselin, S., ... Cohen-Adad, J. (2017). Spinal cord grey matter segmentation challenge. NeuroImage, 152, 312-329. Available
Perrault, W., Duval, T., & Cohen-Adad, J. (2015, May). Comparison of NOGSE and PGSE sequences for axon diameter estimation [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
Pizzolato, M., Wassermann, D., Duval, T., Campbell, J. S. W., Boutelier, T., Cohen-Adad, J., & Deriche, R. (2015, October). A Temperature Phantom to Probe the Ensemble Average Propagator Asymmetry: an In-Silico Study [Paper]. Computational Diffusion Magnetic Resonance Imaging: MICAAI Workshop, Munich, Germany. External link
Pradat, P. F., Cohen-Adad, J., El Mendili, M. M., Lehéricy, S., Blancho, S., Meininger, V., Rossignol, S., & Benali, H. (2011, May). Diffusion and magnetization transfer imaging detects spinal cord lesions in amyotrophic lateral sclerosis [Paper]. 19th ISMRM annual meeting and exhibition, Montréal, Québec. External link
Piché, M., Cohen-Adad, J., Nejad, M. K., Perlbarg, V., Xie, G., Beaudoin, G., Benali, H., & Rainville, P. (2009). Characterization of cardiac-related noise in fMRI of the cervical spinal cord. Magnetic Resonance Imaging, 27(3), 300-310. External link
Querin, G., Saracino, D., Rinaldi, D., Salachas, F., Marchand-Pauvert, V., Cohen-Adad, J., Le Ber, I., & Pradat, P. (2022, October). Cervical spinal cord MRI parameters as predictors of early degeneration in asymptomatic C9Orf72 carriers: a longitudinal study [Poster]. 27th International Congress of the World Muscle Society, Halifax, Nova Scotia, Canada. Published in Neuromuscular Disorders, 32(Supplement). External link
Querin, G., Bede, P., Mendili, M. E., Péllegrini-Issac, M., Rinaldi, D., Catala, M., Saracino, D., Salachas, F., Camuzat, A., Marchand‐Pauvert, V., Cohen-Adad, J., Colliot, O., Le Ber, I., & Pradat, P.‐F. (2020). Spinal Cord MRI for Early Detection of Presymptomatic Pathology in c9orf72 Mutation Carriers: A Longitudinal Neuroimaging Study (2343). Neurology, 94(15_supplem). External link
Querin, G., Bede, P., El Mendili, M., Péllegrini-Issac, M., Rinaldi, D., Catala, M., Saracino, D., Salachas, F., Camuzat, A., Marchand-Pauvert, V., Cohen-Adad, J., Colliot, O., Le Ber, I., & Pradat, P. (2020, September). Spinal cord MRI for early detection of presymptomatic pathology in c9orf72 mutation carriers: A longitudinal neuroimaging study [Abstract]. 25th International Congress of the World-Muscle-Society (WMS 2020) (1 page). Published in Neuromuscular Disorders, 30(1 (supplem). External link
Querin, G., Bede, P., Mendili, M. M. E., Pellegrini-Issac, M., Rinaldi, D., Saracino, D., Salachas, F., Camuzat, A., Marchand-Pauvert, V., Cohen-Adad, J., Colliot, O., Le Ber, I., Pradat, P. F., & Catala, M. (2020, May). Spinal cord MRI for early detection of presymptomatic pathology in C9orf72 mutation carriers: a three time-points longitudinal MRI study [Abstract]. 6th Congress of the European-Academy-of-Neurology (EAN 2020). Published in European Journal of Neurology, 27(S1). External link
Querin, G., Bede, P., El Mendili, M.-M., Li, M., Pélégrini-Issac, M., Rinaldi, D., Catala, M., Saracino, D., Salachas, F., Camuzat, A., Marchand-Pauvert, V., Cohen-Adad, J., Colliot, O., Le Ber, I., & Pradat, P.-F. (2019). Presymptomatic Spinal Cord Pathology In c9orf72 Mutation Carriers: A Longitudinal Neuroimaging Study. Annals of Neurology, 86(2), 158-167. External link
Querin, G., El Mendili, M.-M., Lenglet, T., Behin, A., Stojkovic, T., Salachas, F., Devos, D., Le Forestier, N., Del Mar Amador, M., Debs, R., Lacomblez, L., Meininger, V., Bruneteau, G., Cohen-Adad, J., Lehéricy, S., Laforet, P., Blancho, S., Benali, H., Catala, M., ... Pradat, P.-F. (2019). The spinal and cerebral profile of adult spinal-muscular atrophy: A multimodal imaging study. NeuroImage: Clinical, 21, 101618. Available
Rios, N. L., Gilbert, K. M., Papp, D. S., Cereza, G., Foias, A., Rangaprakash, D., May, M. W., Guerin, B., Wald, L. L., Keil, B., Stockmann, J. P., Barry, R., & Cohen-Adad, J. (2023). An eight‐channel Tx dipole and 20‐channel Rx loop coil array for MRI of the cervical spinal cord at 7 tesla. NMR in Biomedicine, 36(11), e5002 (17 pages). Available
Rangaprakash, G., Guerin, B., Stockmann, J. P., May, M. W., Lopez Rios, N., Gilbert, K. M., Chang, Y., Wald, L. L., Cohen-Adad, J., Keil, B., & Barry, R. L. (2022, May). Performance characterization of three coils for whole brain and/or cervical spinal cord MRI at 7T [Poster]. 2022 Joint annual meeting ISMRM-ESMRMB & ISMRT 31st annual meeting, London, England. External link
Rouhier, L., Cohen, J. P., Perdigon Romero, F., & Cohen-Adad, J. (2020, June). Spine inter vertebral disc labeling using a fully convolutional redundant counting model [Paper]. 26th OHBM annual meeting. Unavailable
Rouhier, L., Parizet, M., Ali Akbar, M., Weber, M., Fehlings, M., & Cohen-Adad, J. (2019, May). Deep learning for prognosis in degenerative cervical myelopathy [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, QC, Canada. External link
Rossignol, S., Barrière, G., Frigon, A., Cohen-Adad, J., & Benali, H. (2009, April). The importance of the spinal CPG in the recovery of locomotion after partial spinal cord lesions [Paper]. 2nd International Association of Neurorestoratology annual Conference (INAR 2009), Beijing, China. Unavailable
Rossignol, S., Barrière, G., Frigon, A., Cohen-Adad, J., & Benali, H. (2009, June). Optimizing locomotion after spinal lesions [Abstract]. 2009 Cellular and Network Functions in the Spinal Cord, Wisconsin-Madison. Unavailable
Schilling, K. G., Combes, A. J. E., Ramadass, K., Rheault, F., Sweeney, G., Prock, L., Sriram, S., Cohen-Adad, J., Gore, J. C., Landman, B. A., Smith, S. A., & O'Grady, K. P. (2024). Influence of preprocessing, distortion correction and cardiac triggering on the quality of diffusion MR images of spinal cord. Magnetic Resonance Imaging, 108, 11-21. External link
Snoussi, H., Cohen-Adad, J., Combès, B., Bannier, É., Tounekti, S., Kerbrat, A., Barillot, C., & Caruyer, E. (2023). Effectiveness of regional diffusion MRI measures in distinguishing multiple sclerosis abnormalities within the cervical spinal cord. Brain and Behavior, 13(11), e3159 (12 pages). Available
Shahrampour, S., Middleton, D., Alizadeh, A., Krisa, L., Naghizadehkashani, S., Faro, S., Flanders, A., Cohen-Adad, J., & Mohamed, F. (2023, April). Measurement of magnetization transfer ratio in typically developed pediatric spinal cord : clinical feasibility, assessment of normative data and age correlation [Poster]. ASIA annual Scientific Meeting, New Orleans, Louisiana, USA. Unavailable
Shahrampour, S., Alizadeh, M., Middleton, D., De Leener, B., Krisa, L., Flanders, A. E., Faro, S. H., Cohen-Adad, J., Mulcahey, M.J., & Mohamed, F. B. (2023, June). Quantitative magnetic resonance imaging to quantify the macro and microstructural changes in normal and pediatrics with spinal cord injury [Poster]. ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Schilling, K. G., O'Grady, K. P., Combes, A. J. E., Sweeney, G., Prock, L., Cohen-Adad, J., Landman, B. A., & Smith, S. A. (2023, June). To trigger or not to trigger – removing cardiac triggering in diffusion MRI of the cervical spinal cord saves time without sacrificing quality [Poster]. ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Snoussi, H., Combes, B., Commowick, O., Bannier, É., Kerbrat, A., Cohen-Adad, J., Barillot, C., & Caruyer, E. (2022, March). Reproducibility and Evolution of Diffusion Mri Measurements Within the Cervical Spinal Cord in Multiple Sclerosis [Paper]. 19th IEEE International Symposium on Biomedical Imaging (ISBI 2022), Kolkata, India (5 pages). External link
Shahrampour, S., De Leener, B., Alizadeh, M., Middleton, D., Krisa, L., Flanders, A.E., Faro, S.H., Cohen-Adad, J., & Mohamed, F.B. (2021). Atlas-based quantification of DTI measures in a typically developing pediatric spinal cord. American Journal of Neuroradiology, 42(9), 1727-1734. Available
Shahrampour, S., De Leener, B., Middleton, D., Alizadeh, M., Krisa, L., Flanders, A., Faro, S., Cohen-Adad, J., & Mohamed, F. (2020, August). Development of pediatric spinal cord white matter atlas : preliminary analysis [Presentation]. In 2020 Joint annual meeting ISMRM & ISMRT. External link
Shahrampour, S., De Leener, B., Middleton, D., Alizadeh, M., Krisa, L., Flanders, A., Faro, S., Cohen-Adad, J., & Mohamed, F. (2020, May). Development of pediatric spinal cord white matter atlas : preliminary analysis [Poster]. 58th ASNR annual meeting. External link
Samson, R. S., Stutters, J., Akbar, M. A., Curt, A., Cohen-Adad, J., Fehlings, M., Freund, P., Innerarity, B., Seif, M., Tur, C., & Wheeler-Kingshott, C. A. M. G. (2020, August). Spinal cord and brain DTI alterations in cervical spondylotic myelopathy (CSM) [Presentation]. In 2020 Joint annual meeting ISMRM & ISMRT. External link
Saliani, A., Zaimi, A., Nami, H., Duval, T., Stikov, N., & Cohen-Adad, J. (2019). Construction of a rat spinal cord atlas of axon morphometry. NeuroImage, 202, UNSP 11615 (14 pages). External link
Shahrampour, S., De Leener, B., Middleton, D., Jonnavithula, K., Alizadeh, M., Pediyakkal, H. F., Krisa, L., Flanders, A., Faro, S., Cohen-Adad, J., & Mohamed, F. (2019, May). Development of a standardized normative pediatric spinal cord structural template : demonstration of an automatic estimation of spinal cord cross sectional area measurements (SCCSA) [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, QC, Canada. External link
Shahrampour, S., De Leener, B., Middleton, D., Jonnavithula, K., Alizadeh, M., Pediyakkal, H., Krisa, L., Flanders, A., Faro, S., Cohen-Adad, J., & Mohamed, F. (2019, May). Development of a standardized normative pediatric spinal cord structural template : demonstration of an automatic estimation of spinal cord cross sectional area measurements (SCCSA) [Presentation]. In 57th ASNR Annual Meeting, Boston, MA, USA. Unavailable
Snoussi, H., Caruyer, E., Cohen-Adad, J., Commowick, O., Combès, B., Bannier, É., Kerbrat, A., & Barillot, C. (2018, April). Geometric evaluation of distortion correction methods in diffusion MRI of the spinal cord [Paper]. IEEE International Symposium on Biomedical Imaging (ISBI 2019), Venice, Italy. External link
Seif, M., Wheeler-Kingshott, C. A. M. G., Cohen-Adad, J., Flanders, A. E., & Freund, P. (2019). Guidelines for the conduct of clinical trials in spinal cord injury: Neuroimaging biomarkers. Spinal Cord, 57(9), 717-728. Available
Samson, R. S., Stutters, J., Ali Akbar, M., Cohen-Adad, J., Curt, A., Fehlings, M., Freund, P., Seif, M., & Wheeler-Kingshott, C. A. M. G. (2019, May). Investigation of DTI parameters in the corticospinal tract : from cervical cord to motor cortex [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
Samson, R. S., Battiston, M., Seif, M., Cohen-Adad, J., Freund, P., & Wheeler-Kingshott, C. A. M. G. (2018, June). Comparison of cervical cord results form a quantitative 3D multi-parameter mapping (MPM) protocol of the whole brain with a dedicated cervical cord protocol [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Shahrampour, S., De Leener, B., Middleton, D., Jonnavithula, K., Alizadeh, M., Pediyakkal, H., Flanders, A., Faro, S., Cohen-Adad, J., & Mohamed, F. (2018, June). Development of a standardized normative pediatric spinal cord structural template : demonstration of an automatic estimation of spinal cord corss sectional area measurements (SCCSA) [Paper]. ASNR 56th annual meeting, Vancouver, CB. Unavailable
Shahrampour, S., De Leener, B., Middleton, D., Flanders, A., Faro, S., Cohen-Adad, J., Alizadeh, M., Krisa, L., & Mohamed, F. (2018, June). Volumetric analysis of pediatric spinal cord structural MRI data using SCT [Paper]. ASNR 56th annual meeting, Vancouver, CB. Unavailable
Saliani, A., Perraud, B., Duval, T., Stikov, N., Rossignol, S., & Cohen-Adad, J. (2017). Axon and myelin morphology in animal and human spinal cord. Frontiers in Neuroanatomy, 11. Available
Samson, R. S., Lévy, S., Schneider, T., Smith, A. K., Smith, S. A., Cohen-Adad, J., & Wheeler-Kingshott, C. A. M. G. (2016). ZOOM or non-ZOOM? Assessing spinal cord diffusion tensor imaging protocols for multi-centre studies. PLOS One, 11(5), 1-14. Available
Stikov, N., Campbell, J. S. W., Stroh, T., Lavelée, M., Frey, S., Novek, J., Nuara, S., Ho, M.-K., Bedell, B. J., Dougherty, R. F., Leppert, I. R., Boudreau, M., Narayanan, S., Duval, T., Cohen-Adad, J., Picard, P.-A., Gasecka, A., Côté, D., & Pike, G. B. (2015). In vivo histology of the myelin g-ratio with magnetic resonance imaging. NeuroImage, 118, 397-405. External link
Stikov, N., Campbell, J. S. W., Stroh, T., Lavelee, M., Frey, S., Novek, J., Nuara, S., Ho, M.-K., Bedell, B. J., Dougherty, R. F., Leppert, I. R., Boudreau, M., Narayanan, S., Duval, T., Cohen-Adad, J., Picard, P.-A., Gasecka, A., Cote, D., & Pike, G. B. (2015). Quantitative analysis of the myelin g-ratio from electron microscopy images of the macaque corpus callosum. Data Brief, 4, 368-373. Available
Stroman, P. W., Wheeler-Kingshott, C. A. M. G., Bacon, M., Schwab, J. M., Bosma, R., Brooks, J., Cadotte, D., Carlstedt, T., Ciccarelli, O., Cohen-Adad, J., Curt, A., Evangelou, N., Fehlings, M. G., Filippi, M., Kelley, B. J., Kollias, S., Mackay, A., Porro, C. A., Smith, S., ... Tracey, I. (2014). The current state-of-the-art of spinal cord imaging: Methods. NeuroImage, 84, 1070. Available
Summers, P., Brooks, J. C. W., & Cohen-Adad, J. (2014). Spinal cord fMRI. In Cohen-Adad, J., & Wheeler-Kingshott, C. A. M. G. (eds.), Quantitative MRI of the spinal cord . External link
Samson, R. S., Cohen-Adad, J., Schneider, T., Smith, A. K., Smith, S. A., & Wheeler-Kingshott, C. A. M. G. (2014, May). ZOOM and non-ZOOM spinal cord diffusion tensor imaging protocols for multi-centre studies [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
Satpute, A. B., Wager, T. D., Cohen-Adad, J., Bianciardi, M., Choi, J.-K., Buhle, J. T., Wald, L. L., & Fedman Barret, L. (2013). Identification of discrete functional subregions of the human periaqueductal gray. PNAS, 110(42), 17101-17106. External link
Setsompop, K., Kimmlingen, R., Eberlein, E., Witzel, T., Cohen-Adad, J., McNab, J. A., Keil, B., Tisdall, M. D., Hoecht, P., Dietz, P., Cauley, S. F., Tountcheva, V., Matschl, V., Lenz, H., Bhat, H., Heberlein, K., Potthast, A., Thein, H., Van Horn, J. D., ... Wald, L. L. (2013). Pushing the limits of in vivo diffusion MRI for the human connectome project. NeuroImage, 80, 220-233. External link
Setsompop, K., Cohen-Adad, J., Gagoski, B. A., Raij, T., Yendiki, A., Keil, B., Wedeen, J., & Wald, L. L. (2012). Improving diffusion MRI using simultaneous multi-slice echo planar imaging. NeuroImage, 63(1), 569-580. External link
Sharman, M. A., Cohen-Adad, J., Descoteaux, M., Messé, A., Benali, H., & Lehericy, S. (2011). Impact of outliers on diffusion tensor and Q-ball imaging: Clinical implications and correction strategies. JRMI, 33(6), 1491-1502. External link
Sharman, M., Cohen-Adad, J., Descoteaux, M., Messé, A., Benali, H., & Lehéricy, S. (2010, May). Impact of outliers in DTI and Q-Ball imaging : clinical implications and correction strategies [Paper]. 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. External link
Setsompop, K., Cohen-Adad, J., McNab, J. A., Gagoski, B. A., Wedeen, V. J., & Wald, L. L. (2010, May). Improving SNR per unit time in diffusion imaging using a blipped-CAIPIRINHA simultaneous multi-slice EPI acquisition [Paper]. 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. External link
Tsagkas, C., Hatipoglu, O., Ocampo-Pineda, M., Melie-Garcia, L., Weigel, M., Barakovic, M., Po-Jui, L., Cohen-Adad, J., Kappos, L., Kuhle, J., & Granziera, C. (2023, February). Advanced Quantitative MRI of Cervical Cord Pathology in Multiple Sclerosis Patients [Poster]. 8th annual Americas Committee for Treatment and Research in Multiple Sclerosis (ACTRIMS 2023), San Diego, CA, USA. Published in Multiple Sclerosis Journal, 29(2 suppl). External link
Trò, R., Roascio, M., Tortora, D., Severino, M., Rossi, A., Cohen-Adad, J., Fato, M., & Arnulfo, G. (2022). Diffusion Kurtosis Imaging of Neonatal Spinal Cord in Clinical Routine. Frontiers in Radiology, 2, 794981 (18 pages). Available
Tinnermann, A., Büchel, C., & Cohen-Adad, J. (2021). Cortico-spinal imaging to study pain. NeuroImage, 224, 17 pages. Available
Topfer, R., Lopez Rios, N., Foias, A., Arango, N., Wald, L. L., Stockmann, J. P., & Cohen-Adad, J. (2019, May). Real-time shimming in the cervical spinal cord using an 8-channel AC/DC array and a capacitive respiratory sensor [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
Topfer, R., Foias, A., Lopez Rios, N., Chauffray, A., Germain, G., Arango, N., Wald, L. L., Stockmann, J., & Cohen-Adad, J. (2018, June). Integrated Bo/Rx coil array for improved spinal cord imaging at 3T [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Topfer, R., Foias, A., Stikov, N., & Cohen-Adad, J. (2018). Real-time correction of respiration-induced distortions in the human spinal cord using a 24-channel shim array. Magnetic Resonance in Medicine, 80(3), 935-946. External link
Topfer, R., Foias, A., Stikov, N., & Cohen-Adad, J. (2017, April). Real-time shimming of the human spinal cord using a 24-channel shim array coil [Poster]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Topfer, R., Starewicz, P., Lo, K.-M., Metzemaekers, K., Jette, D., Hetherington, H. P., Stikov, N., & Cohen-Adad, J. (2016). A 24-channel shim array for the human spinal cord: Design, evaluation, and application. Magnetic Resonance in Medicine, 76(5), 1604-1611. External link
Topfer, R., Germain, G., Stockmann, J., Metzemaekers, K., Hetherington, H., Paquin, R., Starewicz, P., Stikov, N., & Cohen-Adad, J. (2016, May). Very-high order shimming in the human spinal cord using a dedicated 24-channel array coil [Paper]. 24th Annual Meeting of ISMRM, Singapore. External link
Topfer, R., Lo, K.-M., Metzemaekers, K., Jette, D., Hetherington, H. P., Starewicz, P., & Cohen-Adad, J. (2015, May). A 24-channel shim array for real-time shimming of the human spinal cord: Characterization and proof-of-concept experiment. [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
Taso, M., Le Troter, A., Sdika, M., Cohen-Adad, J., Arnoux, P.-J., Guye, M., Ranjeva, J.-P., & Callot, V. (2015). A reliable spatially normalized template of the human spinal cord - Applications to automated white matter/gray matter segmentation and tensor-based morphometry (TBM) mapping of gray matter alterations occurring with age. NeuroImage, 117, 20-28. External link
Touati, J., Taso, M., Fonov, V., Le Troter, A., De Leener, B., Collins, D. L., Callot, V., & Cohen-Adad, J. (2015, May). T1 and T2 template of the human brainstem and spinal cord [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
Taso, M., Le Troter, A., Sdika, M., Fonov, V. S., Cohen-Adad, J., Guye, M., Ranjeva, J.-P., & Callot, V. (2014, May). Validation of a 2D spinal cord probabilistic atlas : Application to FA measurement and VBM study of the GM atrophy occurring with age [Paper]. 22nd Annual Meeting of ISMRM, Milan, Italy. External link
Tisdall, M. D., Witzel, T., Tountcheva, V., McNab, J. A., Cohen-Adad, J., Kimmlingen, R., Hoecht, P., Eberlein, E., Heberlein, K., Schmitt, F., Thein, H., Wedeen, V. J., Rosen, B. R., & Wald, L. L. (2012, May). Improving SNR in high b-value diffusion imaging using Gmax=300 mT/m human gradients [Paper]. 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. External link
Ullmann, E., Pelletier Paquette, J. F., Thong, W., & Cohen-Adad, J. (2014). Automatic labeling of vertebral levels using a robust template-based approach. International Journal of Biomedical Imaging, 2014, 1-9. Available
Valošek, J., Mathieu, T., Schlienger, R., Kowalczyk, O. S., & Cohen-Adad, J. (2024). Automatic segmentation of the spinal cord nerve rootlets. Imaging Neuroscience, 2. External link
Valošek, J., Bédard, S., Keřkovský, M., Rohan, T., & Cohen-Adad, J. (2024). A database of the healthy human spinal cord morphometry in the PAM50 template space. Imaging Neuroscience, 2, 15 pages. Available
Valošek, J., & Cohen-Adad, J. (2024). Reproducible Spinal Cord Quantitative MRI Analysis with the Spinal Cord Toolbox. Magnetic Resonance in Medical Sciences, rev.2023-0 (9 pages). External link
Valošek, J., Bédard, S., Keřkovský, M., Rohan, T., & Cohen-Adad, J. (2023). A database of the healthy human spinal cord morphometry in the PAM50 template space [Dataset]. External link
Valošek, J., Labounek, R., Horák, T., Horáková, M., Bednařík, P., Keřkovský, M., Kočica, J., Rohan, T., Lenglet, C., Cohen-Adad, J., Hluštík, P., Vlčková, E., Kadaňka, Z., Bednařík, J., & Svatkova, A. (2021). Diffusion magnetic resonance imaging reveals tract‐specific microstructural correlates of electrophysiological impairments in non‐myelopathic and myelopathic spinal cord compression. European Journal of Neurology, 28(11), 3784-3797. Available
Valošek, J., Labounek, R., Horák, T., Horáková, M., Bednařík, P., Keřkovský, M., Kočica, J., Rohan, T., Lenglet, C., Cohen-Adad, J., Hluštík, P., Vlčková, E., Kadaňka, Z., Bednařík, J., & Svatkova, A. (2021). Erratum: Diffusion magnetic resonance imaging reveals tract‐specific microstructural correlates of electrophysiological impairments in non‐myelopathic and myelopathic spinal cord compression. European Journal of Neurology, 29(8), 2551-2551. External link
Vallotton, K., David, G., Curt, A., Fehlings, M., Wheeler-Kingshott, C. A. M. G., Samson, R. S., Cohen-Adad, J., Akbar, M. A., Freund, P., & Seif, M. (2021, May). Free water eliminated white matter tract integrity of spinal cord in multiple sclerosis and neuromyelitis optica spectrum disorder [Poster]. 2021 Joint annual meeting ISMRM & ISMRT. External link
Vallotton, K., David, G., Hupp, M., Pfender, N., Cohen-Adad, J., Fehlings, M. G., Samson, R. S., Wheeler-Kingshott, C. A. M. G., Curt, A., Freund, P., & Seif, M. (2021). Tracking White and Gray Matter Degeneration along the Spinal Cord Axis in Degenerative Cervical Myelopathy. Journal of Neurotrauma, 38(21), 2978-2987. External link
Valošek, J., & Cohen-Adad, J. (2021, May). Variations of quantitative MRI metrics along the cervical spinal cord : multi-vendor, multi-center, multi-subject study [Presentation]. In 2021 Joint annual meeting ISMRM & ISMRT. External link
Vincent, O., Gros, C., Cohen, J. P., & Cohen-Adad, J. (2020, June). Automatic segmentation of spinal MS lesions: How to generalize across MR contrasts? [Paper]. 26th OHBM annual meeting. Unavailable
Vahdat, S., Khatibi, A., Lungu, O., Finsterbusch, J., Buchel, C., Cohen-Adad, J., Marchand-Pauvert, V., & Doyon, J. (2020). Resting-state brain and spinal cord networks in humans are functionally integrated. Plos Biology, 18(7), e3000789 (22 pages). External link
Vuong, M.-T., Duval, T., Cohen-Adad, J., & Stikov, N. (2017, April). On the Precision of Myelin Imaging: Characterizing Ex vivo Dog Spinal Cord with MRI and Histology [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Van Assel, C., Mangeat, G., De Leener, B., Stikov, N., Mainero, C., & Cohen-Adad, J. (2017, April). Partial volume effect correction for surface-based cortical mapping [Paper]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. External link
Vahdat, S., Lungu, O., Cohen-Adad, J., Marchand-Pauvert, V., Benali, H., & Doyon, J. (2015). Simultaneous Brain–Cervical Cord fMRI Reveals Intrinsic Spinal Cord Plasticity during Motor Sequence Learning. PLOS Biology, 13(6). Available
Verma, T., & Cohen-Adad, J. (2014). Effect of respiration on the B0 field in the human spinal cord at 3T. Magnetic Resonance in Medicine, 72(6), 1629-1636. External link
Wong, A. L., Hricz, N., Malapati, H., von Guionneau, N., Wong, M., Harris, T., Boudreau, M., Cohen-Adad, J., & Tuffaha, S. (2021). A simple and robust method for automating analysis of naïve and regenerating peripheral nerves. PLOS One, 16(7), 14 pages. Available
Wheeler-Kingshott, C. A. M. G., Stroman, P. W., Schwab, J. M., Bacon, M., Bosma, R., Brooks, J., Cadotte, D. W., Carlstedt, T., Ciccarelli, O., Cohen-Adad, J., Curt, A., Evangelou, N., Fehlings, M. G., Filippi, M., Kelley, B. J., Kollias, S., Mackay, A., Porro, C. A., Smith, S., ... Tracey, I. (2014). The current state-of-the-art of spinal cord imaging: Applications. NeuroImage, 84, 1082-1093. External link
Wedeen, V., Wang, R., Reese, T., Witzel, T., Cohen-Adad, J., Rosen, B. R., & Wald, L. L. (2013, April). Imaging the Grid Structure of the Brain with DSI and QBI with the 3T connectom instrument : conditional validation of in vivo MRI tractography in humans [Paper]. ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. External link
Wedeen, V. J., Wald, L. L., Cohen-Adad, J., Tisdall, M. D., McNab, J. A., Wang, R., Witzel, T., Kimmlingen, R., Eberlein, E., Hoecht, P., Keil, B., Nistler, J., Lehne, D., Heberlein, K., Thein, H., Schmitt, F., Van Horn, J., Toga, A. W., & Rosen, B. R. (2012, May). In vivo imaging of fiber pathways of the human brain with ultra-high gradients [Paper]. 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. External link
Wassermann, D., Cohen-Adad, J., Lehericy, S., Benali, H., Rossignol, S., & Deriche, R. (2010, April). Straightening the spinal Cord using fibre tractography [Paper]. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, Netherlands. External link
Xie, G., Piché, M., Khoshnejad, M., Perlbarg, V., Chen, J. I., Hoge, R. D., Benali, H., Rossignol, S., Rainville, P., & Cohen-Adad, J. (2012). Reduction of physiological noise with independent component analysis improves the detection of nociceptive responses with fMRI of the human spinal cord. NeuroImage, 63(1), 245-252. External link
Xie, G., Piché, M., Cohen-Adad, J., Kosh Nejad, M., Perlbarg, V., Hoge, R., Benali, H., Rossignol, S., & Rainville, P. (2008, November). Characterizing and controlling for physiological noise in human cervical spinal fMRI in response to noxious stimuli. [Paper]. 38th Annual meeting of the Society for Neuroscience, Washington, D.C.. Unavailable
Yu, F. F., Huang, S. Y., Kumar, A., Witzel, T., Liao, C., Duval, T., Cohen-Adad, J., & Bilgic, B. (2022). Erratum: Rapid simultaneous acquisition of macromolecular tissue volume, susceptibility, and relaxometry maps (vol 87, pg 781, 2022). Magnetic Resonance in Medicine, 87(6), 3022-3023. External link
Yu, F. F., Huang, S. Y., Kumar, A., Witzel, T., Liao, C., Duval, T., Cohen-Adad, J., & Bilgic, B. (2022). Rapid simultaneous acquisition of macromolecular tissue volume, susceptibility, and relaxometry maps. Magnetic Resonance in Medicine, 87(2), 781-790. External link
Yu, F. F., Huang, S. Y., Duval, T., Cohen-Adad, J., & Bilgic, B. (2018, June). Rapid simultaneous acquisition of QSM and MTV [Abstract]. Joint Annual Meeting ISMR-ESMRMB 2018, Paris, France. External link
Yu, F., Huang, S. Y., Machado, N., Bireley, J. D., Duval, T., Cohen-Adad, J., Wald, L. L., & Klawiter, E. C. (2017, April). Evaluation of axonal and myelin integrity with advanced MRI methods in multiple sclerosis [Paper]. ASNR 55th annual meeting, Long Beach, California. Unavailable
Yiannakas, M. C., Mustafa, A. M., De Leener, B., Kearney, H., Tur, C., Altmann, D. R., De Angelis, F., Plantone, D., Ciccarelli, O., Miller, D. H., Cohen-Adad, J., & Wheeler-Kingshott, C. A. M. G. (2015). Fully automated segmentation of the cervical cord from T1-weighted MRI using PropSeg: Application to multiple sclerosis. NeuroImage - Clinical, 10, 71-77. Available
Yiannakas, M. C., Mustafa, A., De Leener, B., Cohen-Adad, J., Kearney, H., Miller, D. H., & Wheeler-Kingshott, C. A. M. G. (2015, May). Fully automated segmentation of the cervical spinal cord using PropSeg: application to multiple sclerosis [Paper]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. External link
Zaimi, A., Wabartha, M., Herman, V., Antonsanti, P.-L., Perone, C. S., & Cohen-Adad, J. (2018). AxonDeepSeg: automatic axon and myelin segmentation from microscopy data using convolutional neural networks. Scientific Reports, 8(1), 3816 (11 pages). Available
Zaimi, A., Duval, T., Gasecka, A., Côté, D., Stikov, N., & Cohen-Adad, J. (2016). AxonSeg: open source software for axon and myelin segmentation and morphometric analysis. Frontiers in Neuroinformatics, 10, 1-13. Available
Zhao, W., Cohen-Adad, J., Polimeni, J. K., Keil, B., Guerin, B., Setsompop, K., Serano, P., Mareyam, A., Hoech, P., & Wald, L. L. (2014). Nineteen-channel receive array and four-channel transmit array coil for cervical spinal cord imaging at 7T. Magnetic Resonance in Medecine, 72(1), 291-300. External link
Zhao, W., Cohen-Adad, J., Polimeni, J. R., Guerin, B., Keil, B., Serano, P., Mareyam, A., Hoecht, P., & Wald, L. L. (2012, May). 19-channel Rx array coil and 4-channel Tx loop array for cervical spinal cord imaging at 7T MRI [Paper]. 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. External link
