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Abrishami Shokooh, L. (2021). An Investigation on the Dynamics of Epileptic Networks and Mechanisms Underlying Different Ictal Patterns [Ph.D. thesis, Polytechnique Montréal]. Available
Barletta, V., Herranz, E., Treaba, C. A., Mehndiratta, A., Ouellette, R., Mangeat, G., Granberg, T., Sloane, J. A., Klawiter, E., Cohen-Adad, J., & Mainero, C. (2021). Quantitative 7-Tesla Imaging of Cortical Myelin Changes in Early Multiple Sclerosis. Frontiers in Neurology, 12, 714820 (10 pages). External link
Bautin, P., & Cohen-Adad, J. (2021). Minimum detectable spinal cord atrophy with automatic segmentation: Investigations using an open-access dataset of healthy participants. Neuroimage-Clinical, 32, 102849 (10 pages). External link
Belgharbi, H. (2021). An Anatomically-Realistic Simulation Framework for Ultrasound Localization Microscopy [Master's thesis, Polytechnique Montréal]. Available
Boshkovski, T. (2021). The Myelin-Weighted Connectome: A Multiplex Approach to Characterize Brain Function and Structure [Ph.D. thesis, Polytechnique Montréal]. Available
Braithwaite, B. (2021). Applications des hypothèses de la théorie cinématique à d'autres systèmes biologiques et à la théorie du contrôle optimal [Master's thesis, Polytechnique Montréal]. Available
Carandini, T., Mancini, M., Bogdan, I., Rae, C. L., Barritt, A. W., Sethi, A., Harrison, N., Rashid, W., Scarpini, E., Galimberti, D., Bozzali, M., & Cercignani, M. (2021). Disruption of brainstem monoaminergic fibre tracts in multiple sclerosis as a putative mechanism for cognitive fatigue: a fixel-based analysis. Neuroimage-Clinical, 30, 102587 (13 pages). External link
Champagne, P.-O., Sanon, N. T., Carmant, L., Pouliot, P., Bouthillier, A., & Sawan, M. (2021). Feasibility of implantable iron oxide nanoparticles in detecting brain activity-proof of concept in a rat model. Epilepsy Research, 172, 106585 (5 pages). External link
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021). Scientific Data, 8(1), 242 (1 page). Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Generic acquisition protocol for quantitative MRI of the spinal cord. Nature Protocols, 16(10), 4611-4632. Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 219 (17 pages). Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A. J.E., De Leener, B., Descoteaux, M., Sousa, P. L. , Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 251 (2 pages). Available
Corbin, D. (2021). Investigation de biomarqueurs rétiniens pour la cognition et l'Alzheimer à partir du fundus [Master's thesis, Polytechnique Montréal]. Available
de la Colina, A. N., Badji, A., Robitaille-Grou, M.-C., Gagnon, C., Boshkovski, T., Lamarre-Cliche, M., Joubert, S., Gauthier, C. J., Bherer, L., Cohen-Adad, J., & Girouard, H. (2021). Associations Between Relative Morning Blood Pressure, Cerebral Blood Flow, and Memory in Older Adults Treated and Controlled for Hypertension. Hypertension, 77(5), 1703-1713. External link
de Sivry-Houle, M. P., Beaudoin, S. B., Brais-Brunet, S., Dehaes, M., Godbout, N., & Boudoux, C. (2021). All-fiber few-mode optical coherence tomography using a modally-specific photonic lantern. Biomedical Optics Express, 12(9), 5704-5719. Available
Dorrigiv, D., Simeone, K., Communal, L., Kendall-Dupont, J., St-Georges-Robillard, A., Péant, B., Carmona, E., Mes-Masson, A.-M., & Gervais, T. (2021). Microdissected tissue vs tissue slices - a comparative study of tumor explant models cultured on-chip and off-chip. Cancers, 13(16), 4208 (14 pages). Available
Dwivedi, G., Chevrier, A., Alameh, M.-G., Hoemann, C. D., & Buschmann, M. D. (2021). Quality of Cartilage Repair from Marrow Stimulation Correlates with Cell Number, Clonogenic, Chondrogenic, and Matrix Production Potential of Underlying Bone Marrow Stromal Cells in a Rabbit Model. CARTILAGE, 12(2), 237-250. External link
Gagliano, L., Lesage, F., Nguyen, D. K., Sawan, M., & Assi, E. B. (2021, August). Combining bispectral magnitude and entropy measures to improve classification of preictal and ictal iEEG [Paper]. 34th International Epilepsy Congress (1 page). Published in Epilepsia, 62(S3). External link
Ghasemi, M. (2021). Performance Evaluation of Cyclist's Position Using a Depth Camera-Based Motion Capture System [Ph.D. thesis, Polytechnique Montréal]. Available
Ghattas, M., Dwivedi, G., Lavertu, M., & Alameh, M.-G. (2021). Vaccine Technologies and Platforms for Infectious Diseases: Current Progress, Challenges, and Opportunities. Vaccines, 9(12), 1490 (31 pages). External link
Goyette, P.-A. F. (2021). Highly Multiplexable Open-Space Microfluidics [Ph.D. thesis, Polytechnique Montréal]. Available
Goyette, P.-A., Boulais, E., Tremblay, M., & Gervais, T. (2021). Pixel-based open-space microfluidics for versatile surface processing. Proceedings of the National Academy of Sciences of the United States of America, 118(2), e201924811 (7 pages). External link
Grajales, D., Picot, F., Shams, R., Barkati, M., Delouya, G., Béliveau-Nadeau, D., Nicolas, B., Leblond, F., Menard, C., & Kadoury, S. (2021, October). In Vivo Confirmation of Prostate Tumor Burden During HDR Brachytherapy With a Combined Raman Spectroscopy and MRI Radiomics Approach [Abstract]. ASTRO 63rd Annual Meeting, Chicago, Illinois. Published in International Journal of Radiation Oncology Biology Physics, 111(3 (suppl.)). External link
Hadjab, I., Farlay, D., Crozier, P., Douillard, T., Boivin, G., Chevalier, J., Meille, S., & Follet, H. (2021). Intrinsic properties of osteomalacia bone evaluated by nanoindentation and FTIRM analysis. Journal of Biomechanics, 117, 110247 (10 pages). External link
Hebrard, E. (2021). Développement d'un modèle de détection en imagerie basé sur un système multispectral pour des nanomarqueurs SERRS [Master's thesis, Polytechnique Montréal]. Available
Jeandupeux, E., Alameh, M.-G., Ghattas, M., De Crescenzo, G., & Lavertu, M. (2021). Poly(2-Propylacrylic Acid) Increases In Vitro Bioactivity of Chitosan/mRNA Nanoparticles. Journal of Pharmaceutical Sciences, 110(10), 3439-3449. External link
Jiang, X. J., Perrot, V., Varray, F., Chan, M.-L., Govind, B., Bart, S., & Hartwell, P. (2021, January). Piezoelectric Micromachined Ultrasonic Transducers for Blood Vessel Motion Tracking [Paper]. 34th IEEE International Conference on Micro Electro Mechanical Systems (MEMS 2021), Gainesville, Florida, USA. External link
Kadoury, S., Lopera, D., Shams, R., Beliveau-Nadeau, D., Delouya, G., Boudam, K., Carrier, J.-F., & Menard, C. (2021, May). Registration accuracy of an integrated MR-TRUS navigation system for prostate HDR brachytherapy [Poster]. World Congress of Brachytherapy. Published in Radiotherapy and Oncology, 158. External link
Kantor, C., Boussioux, L., Rauby, B., & Talbot, H. (2021, February). Gradient-Based Localization and Spatial Attention for Confidence Measure in Fine-Grained Recognition using Deep Neural Networks [Paper]. 35th AAAI Conference on Artificial Intelligence / 33rd Conference on Innovative Applications of Artificial Intelligence / 11th Symposium on Educational Advances in Artificial Intelligence. External link
Kassab, A., Toffa, D. H., Robert, M., Lesage, F., Peng, K., & Nguyen, D. K. (2021). Hemodynamic changes associated with common EEG patterns in critically ill patients: Pilot results from continuous EEG-fNIRS study. Neuroimage-Clinical, 32, 102880 (18 pages). External link
Ksantini, N. (2021). Spectroscopie Raman de tissus biologiques dans le domaine temporel [Master's thesis, Polytechnique Montréal]. Available
Lemay, A., Gros, C., Zhuo, Z., Zhang, J., Duan, Y., Cohen-Adad, J., & Liu, Y. (2021). Automatic multiclass intramedullary spinal cord tumor segmentation on MRI with deep learning. NeuroImage - Clinical, 31, 9 pages. Available
Lemoine, É., Tessier, J.-D., Pelletier-Mc Duff, G., Robert, M., Toffa, D., Lesage, F., Nguyen, D. K., & Assi, E. B. Entropy on routine EEG: a fingerprint of recent seizure activity? [Abstract]. 34th International Epilepsy Congress (1 page). Published in Epilepsia, 62(S3). External link
Maier, O., Baete, S. H., Fyrdahl, A., Hammernik, K., Harrevelt, S., Kasper, L., Karakuzu, A., Loecher, M., Patzig, F., Tian, Y., Wang, K., Gallichan, D., Uecker, M., & Knoll, F. (2021). CG-SENSE revisited: Results from the first ISMRM reproducibility challenge. Magnetic Resonance in Medicine, 85(4), 1821-1839. External link
Mangeat, G. (2021). Development of in-Vivo Histology with Quantitative Magnetic Resonance Imaging to Resolve Fine Neurodegenerative Features [Ph.D. thesis, Polytechnique Montréal]. Available
Marin, B. (2021). Caractérisation d'une formulation de bactériophages libres et micro-encapsulés dans un polymère biodégradable poly(ester amide urée) pour traiter les infections d'ulcères diabétiques [Master's thesis, Polytechnique Montréal]. Available
Mezheritsky, T. (2021). Modélisation du mouvement tridimensionnel du foie à partir d'images échographiques 2D par auto-encodeurs convolutionnels [Master's thesis, Polytechnique Montréal]. Available
Milano, F., Chevrier, A., De Crescenzo, G., & Lavertu, M. (2021). Robust Segmentation-Free Algorithm for Homogeneity Quantification in Images. IEEE Transactions on Image Processing, 30, 5533-5544. External link
Mohammadi, H., Gagnon, C., Vincent, T., Kassab, A., Fraser, S., Nigam, A., Lesage, F., & Bherer, L. (2021). Longitudinal Impact of Physical Activity on Brain Pulsatility Index and Cognition in Older Adults with Cardiovascular Risk Factors: A NIRS Study. Brain Sciences, 11(6), 14 pages. Available
Mohammadi, H., Vincent, T., Peng, K., Nigam, A., Gayda, M., Fraser, S., Joanette, Y., Lesage, F., & Bherer, L. (2021). Coronary artery disease and its impact on the pulsatile brain: A functional NIRS study. Human Brain Mapping, 42(12), 3760-3776. External link
Ost, K., Jacobs, W. B., Evaniew, N., Cohen-Adad, J., Anderson, D., & Cadotte, D. W. (2021). Spinal cord morphology in degenerative cervical myelopathy patients ; assessing key morphological characteristics using Mmchine vision tools. Journal of Clinical Medicine, 10(4), 18 pages. Available
Parent, S., Duarte, M. P., Aubin, C.-É., Cobetto, N., Roy-Beaudry, M., Bellefleur, C., Turgeon, I., Labelle, H., & Barchi, S. (2021, October). 3D radiological outcomes for patients with moderate idiopathic scoliosis curves treated with internal (anterior vertebral growth modulation) vs external bracing: 2 years observational study [Abstract]. EUROSPINE 2021, Vienna, Austria (1 page). Published in Brain and Spine, 1(S1). Available
Refet-Mollof, E., Najyb, O., Chermat, R., Glory, A., Lafontaine, J., Wong, P., & Gervais, T. (2021). Hypoxic jumbo spheroids on-a-chip (HOnAChip): insights into treatment efficacy. Cancers, 13(16), 20 pages. Available
Shahrampour, S., De Leener, B., Alizadeh, M., Middleton, D., Krisa, L., Flanders, A.E., Faro, S.H., Cohen-Adad, J., & Mohamed, F.B. (2021). Atlas-based quantification of DTI measures in a typically developing pediatric spinal cord. American Journal of Neuroradiology, 42(9), 1727-1734. Available
Shokooh, L. A., Toffa, D., Lesage, F., & Nguyen, D. K. Identifying different seizure onset and termination patterns and detecting the driver region preceding different onset patterns [Abstract]. 34th International Epilepsy Congress (1 page). Published in Epilepsia, 62(S3). External link
Soucy, J.‐P., Chevrefils, C., Osseiran, S., Sylvestre, J.‐P., Lesage, F., Beaulieu, S., Pascoal, T. A., Provost, K., Arbour, J. D., Rhéaume, M.‐A., Villeneuve, S., Nasreddine, Z. S., Rosa‐Neto, P., Gauthier, S., Robillard, A., Chayer, C., Black, S. E., Kertes, P. J., El Shahawy, H., ... Ritter, A. (2021, July). A retinal deep phenotyping TM platform to predict the cerebral amyloid PET status in older adults [Poster]. Alzheimer's Association International Conference (AAIC 2021), Denver, Colorado (2 pages). Published in Alzheimer's & Dementia, 17(S5). External link
Tahir, W., Kura, S., Zhu, J., Cheng, X., Damseh, R., Tadesse, F., Seibel, A., Lee, B. S., Lesage, F., Sakadzic, S., Boas, D. A., & Tian, L. (2021). Anatomical Modeling of Brain Vasculature in Two-Photon Microscopy by Generalizable Deep Learning. BME Frontiers, 2021, 8620932 (12 pages). Available
Theriault, M., Ruel, T., Léger, P.-M., & Plante, J.-F. (2021, August). Can Competition Though Leaderboards Lead to Better Engagement and Learning of Data Science Concepts? An Experimental Study Completed Research [Paper]. 27th Annual Americas Conference on Information Systems (AMCIS 2021). External link
Tinnermann, A., Büchel, C., & Cohen-Adad, J. (2021). Cortico-spinal imaging to study pain. NeuroImage, 224, 17 pages. Available
Topfer, R. (2021). Local Coils and Prospective Shimming for MRI of the Spinal Cord [Ph.D. thesis, Polytechnique Montréal]. Available
Trigiani, L. J., Lecrux, C., Royea, J., Lavoie, J. L., Lesage, F., Pilote, L., & Hamel, E. (2021). A Longitudinal Pilot Study on Cognition and Cerebral Hemodynamics in a Mouse Model of Preeclampsia Superimposed on Hypertension: Looking at Mothers and Their Offspring. Frontiers in Physiology, 12, 611984 (9 pages). Available
Vallotton, K., David, G., Hupp, M., Pfender, N., Cohen-Adad, J., Fehlings, M. G., Samson, R. S., Wheeler-Kingshott, C. A. M. G., Curt, A., Freund, P., & Seif, M. (2021). Tracking White and Gray Matter Degeneration along the Spinal Cord Axis in Degenerative Cervical Myelopathy. Journal of Neurotrauma, 38(21), 2978-2987. External link
Valošek, J., Labounek, R., Horák, T., Horáková, M., Bednařík, P., Keřkovský, M., Kočica, J., Rohan, T., Lenglet, C., Cohen-Adad, J., Hluštík, P., Vlčková, E., Kadaňka, Z., Bednařík, J., & Svatkova, A. (2021). Diffusion magnetic resonance imaging reveals tract‐specific microstructural correlates of electrophysiological impairments in non‐myelopathic and myelopathic spinal cord compression. European Journal of Neurology, 28(11), 3784-3797. Available
Valošek, J., Labounek, R., Horák, T., Horáková, M., Bednařík, P., Keřkovský, M., Kočica, J., Rohan, T., Lenglet, C., Cohen-Adad, J., Hluštík, P., Vlčková, E., Kadaňka, Z., Bednařík, J., & Svatkova, A. (2021). Erratum: Diffusion magnetic resonance imaging reveals tract‐specific microstructural correlates of electrophysiological impairments in non‐myelopathic and myelopathic spinal cord compression. European Journal of Neurology, 29(8), 2551-2551. External link
Vazquez Romaguera, L. (2021). Image-Based Analysis and Modelling of Respiratory Motion Using Deep Learning Techniques [Ph.D. thesis, Polytechnique Montréal]. Available
Vincent, O. (2021). Impact of Rater Style on Deep Learning Segmentation in Medical Imaging [Master's thesis, Polytechnique Montréal]. Available
Wong, A. L., Hricz, N., Malapati, H., von Guionneau, N., Wong, M., Harris, T., Boudreau, M., Cohen-Adad, J., & Tuffaha, S. (2021). A simple and robust method for automating analysis of naïve and regenerating peripheral nerves. PLOS One, 16(7), 14 pages. Available
Yahia, L., Bayade, G., & Cirotteau, Y. (2021). Natural Coral as a Biomaterial Revisited. American journal of biomedical science & research, 13(6), 667-686. Available
