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Labounek, R., Bondy, M. T., Paulson, A. L., Bédard, S., Abramovic, M., Alonso-Ortiz, E., Atcheson, N. T., Barlow, L. R., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A., Leener, B. D., Descoteaux, M., Loureiro de Sousa, P., Dostál, M., ... Nestrašil, I. (2024). Body size interacts with the structure of the central nervous system: A multi-center in vivo neuroimaging study. bioRxiv, 32 pages. Lien externe
Le Troter, A., Laines Medina, N. J., Mchinda, S., Cohen-Adad, J., & Callot, V. (juin 2023). AMU7T : a 3D qT1 and T2*w high-resolution in vivo template with refined white and gray matter parcellation dedicated to 7T spinal cord MR analyses [Présentation]. Dans ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. Lien externe
Laine Medina, N. J., Gros, C., Cohen-Adad, J., Le Troter, A., & Callot, V. (mai 2022). A multiclass deep-learning model with realistic data augmentation for improved 7T gray matter/spinal cord segmentation on patients and controls [Présentation]. Dans Joint annual Meeting ISMRM ESMRMB ISMRT, London, UK. Lien externe
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Generic acquisition protocol for quantitative MRI of the spinal cord. Nature Protocols, 16(10), 4611-4632. Disponible
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A. J.E., De Leener, B., Descoteaux, M., Sousa, P. L. , Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 251 (2 pages). Disponible
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021). Scientific Data, 8(1), 242 (1 page). Disponible
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 219 (17 pages). Disponible
Kerbrat, A., Gros, C., Badji, A., Bannier, É., Galassi, F., Combes, B., Chouteau, R., Labauge, P., Ayrignac, X., Carra-Dalliere, C., Maranzano, J., Granberg, T., Ouellette, R., Stawiarz, L., Hillert, J., Talbott, J., Tachibana, Y., Hori, M., Kamiya, K., ... Cohen-Adad, J. (2020). Multiple sclerosis lesions in motor tracts from brain to cervical cord: spatial distribution and correlation with disability. Brain, 143(7), 2089-2105. Lien externe
Alonso Ortiz, E., Gros, C., Foias, A., Abramovic, M., Ameitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Buchel, C., Budde, M., Callot, V., De Leener, B., Descoteaux, M., De Sousa, P. L., Dostal, M., Doyon, J., Dvorak, A., ... Cohen-Adad, J. (août 2020). Quantitative MRI of the spinal cord : reproducibility and normative values across 40 sites [Communication écrite]. ISMRM & SMRT annual Meeting & Exhibition (ISMRM 2020). Lien externe
Gros, C., De Leener, B., Badji, A., Maranzano, J., Eden, D., Dupont, S. M., Talbott, J., Zhuoquiong, R., Liu, Y., Granberg, T., Ouellette, R., Tachibana, Y., Hori, M., Kamiya, K., Chougar, L., Stawiarz, L., Hillert, J., Bannier, É., Kerbrat, A., ... Cohen-Adad, J. (2019). Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks. NeuroImage, 184, 901-915. Lien externe
Combès, B., Kerbrat, A., Ferré, J. C., Callot, V., Maranzano, J., Badji, A., Le Page, E., Labauge, P., Ayrignac, X., Dallière, C. C., de Champfleur, N. M., Pelletier, J., Maarouf, A., de Seze, J., Collongues, N., Brassat, D., Durand-Dubief, F., Barillot, C., Bannier, É., & Edan, G. (2019). Focal and diffuse cervical spinal cord damage in patients with early relapsing-remitting MS: A multicentre magnetisation transfer ratio study. Multiple Sclerosis Journal, 25(8), 1113-1123. Lien externe
Eden, D., Gros, C., Badji, A., Dupont, S. M., De Leener, B., Maranzano, J., Zhuoquiong, R., Liu, Y., Granberg, T., Ouellette, R., Stawiarz, L., Hillert, J., Talbott, J., Bannier, É., Kerbrat, A., Edan, G., Labauge, P., Callot, V., Pelletier, J., ... Cohen-Adad, J. (2019). Spatial distribution of multiple sclerosis lesions in the cervical spinal cord. Brain, 142(3), 633-646. Lien externe
Gros, C., Badji, A., Maranzano, J., Zhuoquiong, R., Yaou, L., Bannier, É., Kerbrat, A., Edan, G., Labauge, P., Callot, V., Pelletier, J., Audoin, B., Rasoanandrianina, H., Valsasina, P., Filippi, M., Bakshi, R., Tauhid, S., Prados, F., Yiannakas, M. C., ... Cohen-Adad, J. (juin 2018). Automatic MS lesion segmentation in the spinal cord using deep learning [Affiche]. Joint annual meeting ISMRM - ESMRMB, Paris, France. Lien externe
Gros, C., De Leener, B., Dupont, S. M., Martin, A. R., Fehlings, M. G., Bakshi, R., Tummala, S., Auclair, V., McLaren, D. G., Callot, V., Cohen-Adad, J., & Sdika, M. (2018). Automatic spinal cord localization, robust to MRI contrasts using global curve optimization. Medical Image Analysis, 44, 215-227. Lien externe
Alley, S., Gilbert, G., Wheeler-Kingshott, C. A. M. G., Samson, R. S., Grussu, F., Martin, A., Bannier, É., Callot, V., Smith, S. A., Xu, J., Dewey, B., Weber, K. A., Parrish, T., McLauren, D., Barker, G. J., Papinutto, N., Seif, M., Freund, P., Barry, R. L., ... Cohen-Adad, J. (juin 2018). Consensus acquisition protocol for quantitative MRI of the cervical spinal cord at 3T [Affiche]. Joint annual meeting ISMRM - ESMRMB, Paris, France. Lien externe
De Leener, B., Fonov, V. S., Collins, D. L., Callot, V., Stikov, N., & Cohen-Adad, J. (2018). PAM50: Unbiased multimodal template of the brainstem and spinal cord aligned with the ICBM152 space. NeuroImage, 165, 170-179. Lien externe
Eden, D., Gros, C., Badji, A., Dupont, S., Maranzano, J., Zhuoquiong, R., Liu, Y., Talbott, J., Bannier, É., Kerbrat, A., Edan, G., Labauge, P., Callot, V., Pelletier, J., Audoin, B., Rasoanandrianina, H., Valsasina, P., Filippi, M., Bakshi, R., ... Cohen-Adad, J. (juin 2018). Spatial distribution of multiple sclerosis in the cervical cord [Affiche]. Joint annual meeting ISMRM - ESMRMB, Paris, France. Lien externe
Dupont, S. M., De Leener, B., Taso, M., Le Troter, A., Nadeau, S., Stikov, N., Callot, V., & Cohen-Adad, J. (2017). Fully-integrated framework for the segmentation and registration of the spinal cord white and gray matter. NeuroImage, 150, 358-372. Lien externe
Gros, C., De Leener, B., Dupont, S. M., Martin, A. R., Fehlings, M. G., Bakshi, R., Tummala, S., Auclair, V., McLaren, D. G., Callot, V., Sdika, M., & Cohen-Adad, J. (septembre 2017). OptiC: Robust and automatic spinal cord localization on a large variety of MRI data using a distance transform based global optimization [Communication écrite]. 20th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2017), Québec City, QC, Canada. Lien externe
De Leener, B., Fonov, V., Collins, D. L., Callot, V., Stikov, N., & Cohen-Adad, J. (avril 2017). PAM50 : multimodal template of the brainstem and spinal cord compatible with the ICBM152 space [Affiche]. ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Lien externe
De Leener, B., Lévy, S., Dupont, S. M., Fonov, V. S., Stikov, N., Collins, D. L., Callot, V., & Cohen-Adad, J. (2017). SCT: Spinal Cord Toolbox, an open-source software for processing spinal cord MRI data. NeuroImage, 145, 24-43. Lien externe
De Leener, B., Taso, M., Fonov, V., Le Troter, A., Stikov, N., Collins, L., Callot, V., & Cohen-Adad, J. (mai 2016). Fully-integrated T1, T2, T2*, white and gray matter atlases of the spinal cord [Affiche]. 24th Annual Meeting of ISMRM, Singapore. Lien externe
Fradet, L., Arnoux, P.-J., Callot, V., & Petit, Y. (2016). Geometrical variations in white and gray matter affect the biomechanics of spinal cord injuries more than the arachnoid space. Advances in Mechanical Engineering, 8(8), 168781401666470. Disponible
De Leener, B., Taso, M., Cohen-Adad, J., & Callot, V. (2016). Segmentation of the human spinal cord. Magnetic Resonance Materials in Physics, Biology and Medicine, 29(2), 125-153. Lien externe
Taso, M., Le Troter, A., Sdika, M., Cohen-Adad, J., Arnoux, P.-J., Guye, M., Ranjeva, J.-P., & Callot, V. (2015). A reliable spatially normalized template of the human spinal cord - Applications to automated white matter/gray matter segmentation and tensor-based morphometry (TBM) mapping of gray matter alterations occurring with age. NeuroImage, 117, 20-28. Lien externe
De Leener, B., Roux, A., Touati, J., Levy, S., Taso, M., Fonov, V., Collins, D. L., Callot, V., & Cohen-Adad, J. (mai 2015). Template-based analysis of multi-parametric MRI data with the Spinal Cord Toolbox [Communication écrite]. ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Lien externe
Benhamou, M., Fonov, V., Taso, M., Le Troter, A., Sdika, M., Collins, L., Callot, V., & Cohen-Adad, J. (mai 2014). Atlas of white-matter tracts in the human spinal cord [Communication écrite]. 22nd Annual Meeting of ISMRM, Milan, Italy. Lien externe
Fonov, V., Le Troter, A., Taso, M., Leveque, G., Benhamou, M., Sdika, M., Collins, D. L., Callot, V., & Cohen-Adad, J. (mai 2014). MNI-Poly-AMU average anatomical template for automatic spinal cord measurements [Communication écrite]. 22nd Annual Meeting of ISMRM, Milan, Italy. Lien externe
Cohen-Adad, J., De Leener, B., Benhamou, M., Cadotte, D., Fleet, D., Cadotte, A., Fehlings, M. G., Pelletier Paquette, J. F., Thong, W., Taso, M., Collins, D. L., Callot, V., & Fonov, V. (juin 2014). Spinal cord toolbox : an open-source framework for processing spinal cord MRI data [Communication écrite]. 20th Annual Meeting of OHBM, Hamburg, Germany. Lien externe
Taso, M., Le Troter, A., Sdika, M., Fonov, V. S., Cohen-Adad, J., Guye, M., Ranjeva, J.-P., & Callot, V. (mai 2014). Validation of a 2D spinal cord probabilistic atlas : Application to FA measurement and VBM study of the GM atrophy occurring with age [Communication écrite]. 22nd Annual Meeting of ISMRM, Milan, Italy. Lien externe
