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Amine Elforaici, M. E., Montagnon, E., Azzi, F., Trudel, D., Nguyen, B., Turcotte, S., Tang, A., & Kadoury, S. (2022, March). Semi-Supervised Tumor Response Grade Classification from Histology Images of Colorectal Liver Metastases [Paper]. 2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI 2022), Kolkata, India (5 pages). External link
Aubertin, K., Desroches, J., Jermyn, M., Trinh, V. Q., Saad, F., Trudel, D., & Leblond, F. (2018). Combining high wavenumber and fingerprint raman spectroscopy for the detection of prostate cancer during radical prostatectomy. Biomedical Optics Express, 9(9), 4294-4305. External link
Aubertin, K., Quoc-Trinh, V., Jermyn, M., Baksic, P., Grosset, A.-A., Desroches, J., St-Arnaud, K., Birlea, M., Vladoiu, M. C., Latour, M., Albadine, R., Saad, F., Leblond, F., & Trudel, D. (2018). Mesoscopic characterization of prostate cancer using Raman spectroscopy : potential for diagnostics and therapeutics. BJU International, 122(2), 326-336. External link
Aubertin, K., Birlea, M., Pinto, M., St-Arnaud, K., Trinh, V. Q., Grosset, A.-A., Leblond, F., & Trudel, D. (2017, December). Towards the use of Raman spectroscopy to guide prostate biopsy procedure [Poster]. AACR Special Conference on Prostate Cancer: Advances in Basic, Translational, and Clinical Research, Orlando, Florida. Published in Cancer Research, 78(16). External link
Aubertin, K., Trinh, V., Jermyn, M., Desroches, J., St-Pierre, C., Vladoiu, M.-C., Grosset, A.-A., Saad, F., Trudel, D., & Leblond, F. (2014, February). Raman Spectroscopy for Prostate Cancer Detection and Characterization [Paper]. 58th Annual Meeting of the Biophysical-Society, San Francisco, CA. Published in Biophysical Journal, 112(3). External link
Aubertin, K., Quoc-Huy, T., Jermyn, M., St-Pierre, C., Vladoiu, M.-C., Grosset, A.-A., Saad, F., Trudel, D., & Leblond, F. (2017, January). Raman spectroscopy for prostate cancer detection and characterization (Conference Presentation) [Paper]. Therapeutics and Diagnostics in Urology: Lasers, Robotics, Minimally Invasive and Advanced Biomedical Devices, USA. External link
Bido, A. T., Ember, K. J. I., Trudel, D., Durand, M., Leblond, F., & Brolo, A. G. (2023). Detection of SARS-CoV-2 in saliva by a low-cost LSPR-based sensor. Analytical Methods, 32(32), 3955-3966. External link
Beaulieu, É., Laurence, A., Birlea, M., Sheehy, G., Angulo-Rodriguez, L., Latour, M., Albadine, R., Saad, F., Trudel, D., & Leblond, F. (2020). Wide-field optical spectroscopy system integrating reflectance and spatial frequency domain imaging to measure attenuation-corrected intrinsic tissue fluorescence in radical prostatectomy specimens. Biomedical Optics Express, 11(4), 2052-2072. Available
Darviot, C., Gosselin, B., Martin, F., Patskovsky, S., Jabin, I., Bruylants, G., Trudel, D., & Meunier, M. (2024). Multiplexed immunolabelling of cancer using bioconjugated plasmonic gold–silver alloy nanoparticles. Nanoscale Advances, 2024, 9 pages. Available
David, S., Tran, T., Dallaire, F., Sheehy, G., Azzi, F., Trudel, D., Tremblay, F., Ömeroğlu, A., Leblond, F., & Meterissian, S. (2023). In situ Raman spectroscopy and machine learning unveil biomolecular alterations in invasive breast cancer. Journal of Biomedical Optics, 28(3), 036009 (18 pages). External link
David, S., Plante, A., Dallaire, F., Tremblay, J.-P., Sheehy, G., Macdonald, E., Forrest, L., Daneshmand, M., Trudel, D., Wilson, B. C., Hopkins, L., Murugkar, S., Vanderhyden, B., & Leblond, F. (2022). Multispectral label-free Raman spectroscopy can detect ovarian and endometrial cancer with high accuracy. Journal of Biophotonics, 15(2), 10 pages. External link
Dallaire, F., Picot, F., Tremblay, J.-P., Sheehy, G., Lemoine, É., Agarwal, R., Kadoury, S., Trudel, D., Lesage, F., Petrecca, K., & Leblond, F. (2020). Quantitative spectral quality assessment technique validated using intraoperative in vivo Raman spectroscopy measurements. Journal of Biomedical Optics, 25(4). Available
Desroches, J., Jermyn, M., Pinto, M., Picot, F., Tremblay, M.-A., Obaid, S., Marple, E., Urmey, K., Trudel, D., Soulez, G., Guiot, M.-C., Wilson, B. C., Petrecca, K., & Leblond, F. (2018). A new method using Raman spectroscopy for in vivo targeted brain cancer tissue biopsy. Scientific Reports, 8(1). Available
Elforaici, M. E. A., Montagnon, E., Romero, F. P., Le, W. T., Azzi, F., Trudel, D., Nguyen, B., Turcotte, S., Tang, A., & Kadoury, S. (2025). Semi-supervised ViT knowledge distillation network with style transfer normalization for colorectal liver metastases survival prediction. Medical Image Analysis, 99, 103346 (16 pages). External link
Ember, K. J. I., Ksantini, N., Dallaire, F., Sheehy, G., Tran, T., Dehaes, M., Durand, M., Trudel, D., & Leblond, F. (2024). Liquid saliva-based Raman spectroscopy device with on-board machine learning detects COVID-19 infection in real-time. The Analyst, 149(22), 5535-5545. Available
Ember, K., Ksantini, N., Dallaire, F., Sheehy, G., Noé, A., Tran, T., Durand, M., Trudel, D., & Leblond, F. (2024, January). Rapid detection of COVID-19 in liquid saliva using reagent-free Raman spectroscopy [Presentation]. In SPIE Photonics West 2024, San Francisco, California, United States. External link
Elforaici, M. E. A., Azzi, F., Trudel, D., Nguyen, B., Montagnon, E., Tang, A., Turcotte, S., & Kadoury, S. (2024, May). Cell-Level GNN-Based Prediction of Tumor Regression Grade in Colorectal Liver Metastases From Histopathology Images [Paper]. 21st IEEE International Symposium on Biomedical Imaging (ISBI 2024), Athens, Greece (5 pages). External link
Ember, K., Daoust, F., Mahfoud, M., Dallaire, F., Ahmad, E. Z., Tran, T., Plante, A., Diop, M.-K., Nguyen, T., St-Georges-Robillard, A., Ksantini, N., Lanthier, J., Filiatrault, A., Sheehy, G., Beaudoin, G., Quach, C., Trudel, D., & Leblond, F. (2022). Saliva-based detection of COVID-19 infection in a real-world setting using reagent-free Raman spectroscopy and machine learning. Journal of Biomedical Optics, 27(2), 025002 (24 pages). Available
Gagnon, J. R., Allen, C. H., Trudel, D., Leblond, F., Stys, P. K., Brideau, C., & Murugkar, S. (2023). Spectral focusing-based stimulated Raman scattering microscopy using compact glass blocks for adjustable dispersion. Biomedical Optics Express, 14(6), 2510-2522. External link
Grosset, A.-A., Dallaire, F., Nguyen, T., Birlea, M., Wong, J., Daoust, F., Roy, N., Kougioumoutzakis, A., Azzi, F., Aubertin, K., Kadoury, S., Latour, M., Albadine, R., Prendeville, S., Boutros, P., Fraser, M., Bristow, R. G., Van Der Kwast, T., Orain, M., ... Trudel, D. (2020). Data from: Identification of intraductal carcinoma of the prostate on tissue specimens using Raman micro-spectroscopy: A diagnostic accuracy case-control study with multicohort validation [Dataset]. External link
Grosset, A.-A., Dallaire, F., Nguyen, T., Birlea, M., Wong, J., Daoust, F., Roy, N., Kougioumoutzakis, A., Azzi, F., Aubertin, K., Kadoury, S., Latour, M., Albadine, R., Prendeville, S., Boutros, P., Fraser, M., Bristow, R. G., van der Kwast, T., Orain, M., ... Trudel, D. (2020). Identification of intraductal carcinoma of the prostate on tissue specimens using Raman micro-spectroscopy: A diagnostic accuracy case-control study with multicohort validation. Plos Medicine, 17(8), e1003281 (20 pages). External link
Grosset, A.-A., St-Pierre, C., St-Arnaud, K., Aubertin, K., Jermyn, M., Leblond, F., & Trudel, D. (2017, December). Raman microscopy to assess biochemical recurrence risk after radical prostatectomy [Poster]. AACR Special Conference on Prostate Cancer: Advances in Basic, Translational, and Clinical Research, Orlando, Florida, USA. Published in Cancer Research, 78(16). External link
Grosset, A.-A., St-Pierre, C., Jermyn, M., Aubertin, K., Kougioumoutzakis, A., Pineau, M., St-Arnaud, K., Vladoiu, M. C., Leblond, F., & Trudel, D. (2017, March). Improving Diagnostic Accuracy in the Pathology Workflow by Integration of Raman Microscopy [Abstract]. 106th Annual Meeting of the United-States-and-Canadian-Academy-of-Pathology (USCAP 2017), San Antonio, TX. Published in Modern Pathology, 30(S2). External link
Jermyn, M., Desroches, J., Aubertin, K., St-Arnaud, K., Madore, W.-J., De Montigny, E., Guiot, M.-C., Trudel, D., Wilson, B. C., Petrecca, K., & Leblond, F. (2016). A review of Raman spectroscopy advances with an emphasis on clinical translation challenges in oncology. Physics in Medicine and Biology, 61(23), R370-R400. External link
Lopera, D. O. G., Picot, F., Shams, R., Dallaire, F., Sheehy, G., Alley, S., Barkati, M., Delouya, G., Carrier, J.-F., Birlea, M., Trudel, D., Leblond, F., Ménard, C., & Kadoury, S. (2022). Image-guided Raman spectroscopy navigation system to improve transperineal prostate cancer detection. Part 2: in-vivo tumor-targeting using a classification model combining spectral and MRI-radiomics features. Journal of Biomedical Optics, 27(9), 095004 (16 pages). External link
Lemoine, É., Dallaire, F., Yadav, R., Agarwal, R., Kadoury, S., Trudel, D., Guiot, M.-C., Petrecca, K., & Leblond, F. (2019). Feature engineering applied to intraoperative in vivo Raman spectroscopy sheds light on molecular processes in brain cancer: a retrospective study of 65 patients. Analyst, 144(22), 6517-6532. External link
Laurence, A., Beaulieu, É., Nguyen, D. K., Bouthillier, A., Trudel, D., & Leblond, F. (2019, June). Multimodal imaging platform for surgical guidance during epilepsy surgery [Paper]. Diffuse Optical Spectroscopy and Imaging VII, Munich, Germany (4 pages). External link
Marcoux-Valiquette, P., Darviot, C., Wang, L., Grosset, A.-A., Hasanzadeh Kafshgari, M., Birela, M., Patskovsky, S., Trudel, D., & Meunier, M. (2021). Multiplexed plasmonic nano-labeling for bioimaging of cytological stained samples. Cancers, 13(14), 3509 (10 pages). Available
Matombi, A. N., Kafshgari, M. H., Wang, L., Patskovsky, S., Trudel, D., & Meunier, M. (2020). Sensitive and Rapid Cancer Diagnosis with Immunoplasmonic Assay Based on Plasmonic Nanoparticles: Toward Fine-Needle Aspiration Cytology. ACS Applied Nano Materials, 3(5), 4171-4177. External link
Picot, F., Shams, R., Dallaire, F., Sheehy, G., Tran, T., Grajales, D., Birlea, M., Trudel, D., Ménard, C., Kadoury, S., & Leblond, F. (2022). Image-guided Raman spectroscopy navigation system to improve transperineal prostate cancer detection. Part 1: Raman spectroscopy fiber-optics system and in situ tissue characterization. Journal of Biomedical Optics, 27(9), 095003 (14 pages). External link
Plante, A., Dallaire, F., Grosset, A.-A., Nguyen, T., Birlea, M., Wong, J., Daoust, F., Roy, N., Kougioumoutzakis, A., Azzi, F., Aubertin, K., Kadoury, S., Latour, M., Albadine, R., Prendeville, S., Boutros, P., Fraser, M., Bristow, R. G., Van Der Kwast, T., ... Leblond, F. (2021). Dimensional reduction based on peak fitting of Raman micro spectroscopy data improves detection of prostate cancer in tissue specimens. Journal of Biomedical Optics, 26(11), 14 pages. External link
Pinto, M., Zorn, K. C., Tremblay, J.-P., Desroches, J., Dallaire, F., Aubertin, K., Marple, E., Kent, C., Leblond, F., Trudel, D., & Lesage, F. (2019). Integration of a Raman spectroscopy system to a robotic-assisted surgical system for real-time tissue characterization during radical prostatectomy procedures. Journal of Biomedical Optics, 24(2), 025001 (10 pages). Available
Pinto, M., Aubertin, K., Desroches, J., Jermyn, M., Trinh, V. Q.-H., Vladoiu, M. C., Grosset, A. A., Lavallee, A. P., Benzyane, I., Benzyane, I., Benzyane, I., Faci, N., Richard, M. E., Duong, L., Haas, C., Badawy, Y., Saad, F., Zorn, K., Lesage, F., ... Trudel, D. (2017, April). Towards live detection of cancerous tissue during radical prostatectomy using a raman spectroscopy probe [Paper]. Bio-Optics: Design and Application (BODA 2017), San Diego, CA, United States. External link
Sheehy, G., Picot, F., Dallaire, F., Ember, K., Nguyen, T., Petrecca, K., Trudel, D., & Leblond, F. (2023). Open-sourced Raman spectroscopy data processing package implementing a baseline removal algorithm validated from multiple datasets acquired in human tissue and biofluids. Journal of Biomedical Optics, 28(2), 025002 (20 pages). External link
Shams, R., Picot, F., Grajales, D., Sheehy, G., Dallaire, F., Birlea, M., Saad, F., Trudel, D., Ménard, C., Leblond, F., & Kadoury, S. (2020). Pre-clinical evaluation of an image-guided in-situ Raman spectroscopy navigation system for targeted prostate cancer interventions. International Journal of Computer Assisted Radiology and Surgery, 15(5), 867-876. External link
St-Arnaud, K., Aubertin, K., Strupler, M., Madore, W.-J., Grosset, A.-A., Petrecca, K., Trudel, D., & Leblond, F. (2018). Development and characterization of a handheld hyperspectral Raman imaging probe system for molecular characterization of tissue on mesoscopic scales. Medical Physics, 45(1), 328-339. External link
St-Pierre, C., Madore, W.-J., De Montigny, É., Trudel, D., Boudoux, C., Godbout, N., Mes-Masson, A.-M., Rahimi, K., & Leblond, F. (2017). Dimension reduction technique using a multilayered descriptor for high-precision classification of ovarian cancer tissue using optical coherence tomography: a feasibility study. Journal of Medical Imaging, 4(4), 13 pages. External link
Wang, L., Darviot, C., Zapata-Farfan, J., Patskovsky, S., Trudel, D., & Meunier, M. (2019). Designable nanoplasmonic biomarkers for direct microscopy cytopathology diagnostics. Journal of Biophotonics, 12(11), e201900166 (11 pages). External link
