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Alonso Ortiz, E., Papp, D., Barry, R., Poëti, K., Seifert, A. C., Gilbert, K. M., Paska, J., Eippert, F., Weiskopf, N., Beghini, L., Graedel, N., Trampel, R., Callaghan, M. F., Aigner, C. S., Seif, M., Freund, P., Destruel, A., Callot, V., Vannesjo, J., & Cohen-Adad, J. (2025, May). Multi-center benchmarking of cervical spinal cord RF coils at 7T: A traveling spines study [Paper]. ISMRM & ISMRT Annual Meeting (ISMRM-ISMRT 2025), Honolulu, Hawaii, USA. External link
Alonso Ortiz, E., Papp, D. S., Barry, R., Poëti, K., Seifert, A. C., Gilbert, K. M., Lopez Rios, N., Paska, J., Eippert, F., Weiskopf, N., Beghini, L., Graedel, N. N., Trampel, R., Callaghan, M. F., Stefan Aigner, C., Freund, P., Seif, M., Destruel, A., Callot, V., ... Cohen-Adad, J. (2025). Multi‐center benchmarking of cervical spinal cord RF coils for 7 T MRI: A traveling spines study. Magnetic Resonance in Medicine, 94(3), 1339-1355. Available
Alley, S., Gilbert, G., Wheeler-Kingshott, C. A. M. G., Samson, R. S., Grussu, F., Martin, A., Bannier, É., Callot, V., Smith, S. A., Xu, J., Dewey, B., Weber, K. A., Parrish, T., McLauren, D., Barker, G. J., Papinutto, N., Seif, M., Freund, P., Barry, R. L., ... Cohen-Adad, J. (2018, June). Consensus acquisition protocol for quantitative MRI of the cervical spinal cord at 3T [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Banerjee, R., Kaptan, M., Tinnermann, A., Khatibi, A., Dabbagh, A., Buechel, C., Kündig, C. W., Law, C., Pfyffer, D., Lythgoe, D. J., Tsivaka, D., Van De Ville, D., Eippert, F., Muhammad, F., Glover, G. H., Dávid, G., Haynes, G., Haaker, J., Brooks, J. C. W., ... Cohen-Adad, J. (2025, May). EPISeg: Automatic Segmentation of Spinal Cord fMRI Data [Paper]. ISMRM & ISMRT Annual Meeting (ISMRM-ISMRT 2025), Honolulu, Hawaii, USA. Published in Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition. External link
Banerjee, R., Kaptan, M., Tinnermann, A., Khatibi, A., Dabbagh, A., Büchel, C., Kündig, C. W., Law, C. S., Pfyffer, D., Lythgoe, D. J., Tsivaka, D., Van De Ville, D., Eippert, F., Muhammad, F., Glover, G. H., Dávid, G., Haynes, G., Haaker, J., Brooks, J. C., ... Cohen-Adad, J. (2025). EPISeg: Automated segmentation of the spinal cord on echo planar images using open-access multi-center data. Imaging Neuroscience, 30 pages. External link
Bédard, S., Valošek, J., Seif, M., Curt, A., Schading-Sassenhausen, S., Pfender, N., Freund, P., Hupp, M., & Cohen-Adad, J. (2025). Normalizing spinal cord compression measures in degenerative cervical myelopathy. The Spine Journal, 25(9), 1951-1963. Available
Bédard, S., Enamundram, M. V. N. K., Kaptan, M., Eippert, F., Kinany, N., Ricchi, I., Van De Ville, D., Freund, P., Hupp, M., Lee, L., Traboulsee, A., Tam, R., Prat, A., Vavasour, Z., Kolind, S., Oh, J., Stefan Aigner, C., & Cohen-Adad, J. (2024, May). Automatic spinal cord segmentation: Generalization across MR parameters, sites, vendors and pathologies [Abstract]. ISMRM & ISMRT Annual Meeting (ISMRM-ISMRT 2024), Toronto, ON, Canada (1 page). External link
Bédard, S., Enamundram, N. K., Kaptan, M., Eippert, F., Kinany, N., Ricchi, I., Van De Ville, D., Freund, P., Hupp, M., Lee, L. E., Traboulsee, A., Kolind, S., Oh, J., Aigner, C. S., & Cohen-Adad, J. (2024, May). Automatic spinall cord segmentation : generalization across MR parameters, sites, vendors and pathologies (affiche) [Abstract]. ISMRM & ISMRT annual meeting & exhibition, Singapore. External link
Callot, V., Bennasser, M., Mchinda, S., Papp, D., Barry, R. L., Beghini, L., Seifert, A. C., Alonso Ortiz, E., Cohen-Adad, J., Graedel, N., Callaghan, M. F., Eippert, F., Weiskopf, N., Aigner, C. S., Freund, P., Vannesjo, J., Destruel, A., Dary, H., Guye, M., & Seif, M. (2025, May). Ultra-high field cervical spinal cord quantitative MRI: A 7T multi-center study of traveling spines [Paper]. ISMRM & ISMRT Annual Meeting (ISMRM-ISMRT 2025), Honolulu, Hawaii, USA. External link
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Generic acquisition protocol for quantitative MRI of the spinal cord. Nature Protocols, 16(10), 4611-4632. Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., Sousa, P. L. , Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 251 (2 pages). Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021). Scientific Data, 8(1), 242 (1 page). Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 219 (17 pages). Available
David, G., Mohammadi, S., Martin, A. R., Cohen-Adad, J., Weiskopf, N., Thompson, A., & Freund, P. (2019). Traumatic and nontraumatic spinal cord injury: pathological insights from neuroimaging. Nature Reviews Neurology, 15(12), 718-731. External link
Enamundram, M. V. N. K., Bédard, S., Valošek, J., Aigner, C. S., Bannier, E., Bednařík, J., Callot, V., Combes, A., Curt, A., David, G., Eippert, F., Farner, L., G. Fehlings, M., Freund, P., Granberg, T., Granziera, C., Horn, U., Horák, T., Humphreys, S., ... Cohen-Adad, J. (2026). Monitoring morphometric drift in lifelong learning segmentation of the spinal cord. Imaging Neuroscience, 40 pages. External link
Enamundram, M. V. N. K., Valošek, J., Farner, L., Pfyffer, D., Schading, S., Lebret, A., Dávid, G., Smith, A. C., Weber, K. A., Seif, M., Freund, P., & Cohen-Adad, J. (2024, October). SCIsegV2: A Universal Tool for Segmentation of Intramedullary Lesions in Spinal Cord Injury [Paper]. 3rd International Workshop on Applications of Medical Artificial Intelligence (AMAI 2024/MICCAI 2024), Marrakesh, Morocco. Published in Lecture notes in computer science. External link
Enamundram, M. V. N. K., Valošek, J., Smith, A. C., Pfyffer, D., Schading-Sassenhausen, S., Farner, L., Weber, K. A., Freund, P., & Cohen-Adad, J. (2024). SCIseg: Automatic Segmentation of Intramedullary Lesions in Spinal Cord Injury on T2-weighted MRI Scans. Radiology Artificial Intelligence, 3 pages. External link
Freund, P., Boller, V., Emmenegger, T. M., Akbar, M., Hupp, M., Pfender, N., Wheeler-Kingshott, C. A. M. G., Cohen-Adad, J., Fehlings, M. G., Curt, A., & Seif, M. (2024). Quantifying neurodegeneration of the cervical cord and brain in degenerative cervical myelopathy: A multicentre study using quantitative magnetic resonance imaging. European Journal of Neurology, e16297 (12 pages). External link
Labounek, R., Bondy, M. T., Paulson, A., Bédard, S., Abramovic, M., Alonso-Ortiz, E., Atcheson, N., Barlow, L., Barry, R., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A., De Leener, B., Descoteaux, M., Sousa, P. L. , Dostál, M., ... Nestrašil, I. (2025). Body size and intracranial volume interact with the structure of the central nervous system: A multi-center in vivo neuroimaging study. Imaging Neuroscience, 3, 31 pages. Available
Labounek, R., Bondy, M. T., Paulson, A. L., Bédard, S., Abramovic, M., Alonso Ortiz, E., Atcheson, N. T., Barlow, L. R., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A., De Leener, B., Descoteaux, M., Loureiro de Sousa, P., Dostál, M., ... Nestrašil, I. (2024). Body size interacts with the structure of the central nervous system: A multi-center in vivo neuroimaging study. bioRxiv, 32 pages. Available
Prados, F., Ashburner, J., Blaiotta, C., Brosch, T., Carballido-Gamio, J., Cardoso, M. J., Conrad, B. N., Datta, E., Dávid, G., De Leener, B., Dupont, S. M., Freund, P., Wheeler-Kingshott, C. A. M. G., Grussu, F., Henry, R., Landman, B. A., Ljungberg, E., Lyttle, B., Ourselin, S., ... Cohen-Adad, J. (2017). Spinal cord grey matter segmentation challenge. NeuroImage, 152, 312-329. Available
Samson, R. S., Stutters, J., Akbar, M. A., Curt, A., Cohen-Adad, J., Fehlings, M., Freund, P., Innerarity, B., Seif, M., Tur, C., & Wheeler-Kingshott, C. A. M. G. (2020, August). Spinal cord and brain DTI alterations in cervical spondylotic myelopathy (CSM) [Presentation]. In 2020 Joint annual meeting ISMRM & ISMRT. External link
Seif, M., Wheeler-Kingshott, C. A. M. G., Cohen-Adad, J., Flanders, A. E., & Freund, P. (2019). Guidelines for the conduct of clinical trials in spinal cord injury: Neuroimaging biomarkers. Spinal Cord, 57(9), 717-728. Available
Samson, R. S., Stutters, J., Ali Akbar, M., Cohen-Adad, J., Curt, A., Fehlings, M., Freund, P., Seif, M., & Wheeler-Kingshott, C. A. M. G. (2019, May). Investigation of DTI parameters in the corticospinal tract : from cervical cord to motor cortex [Paper]. ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. External link
Valošek, J., Pfyffer, D., Enamundram, M. V. N. K., Farner, L., Schading-Sassenhausen, S., Freund, P., & Cohen-Adad, J. (2025). Automatic morphometry of spinal cord injury lesions. Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition. Presented at ISMRM & ISMRT Annual Meeting (ISMRM-ISMRT 2025), Honolulu, Hawaii, USA. External link
Valošek, J., Enamundram, M. V. N. K., Bouthillier, M., Schading, S., Farner, L., Pfyffer, D., Smith, A. C., Weber, K. A. I. I., Freund, P., & Cohen-Adad, J. (2024, May). Automatic segmentation of T2-weighted hyperintense lesions in spinal cord injury [Abstract]. ISMRM & ISMRT annual Meeting & Exhibition, Singapore, Singapore. Published in Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition. External link
Vallotton, K., David, G., Curt, A., Fehlings, M., Wheeler-Kingshott, C. A. M. G., Samson, R. S., Cohen-Adad, J., Akbar, M. A., Freund, P., & Seif, M. (2021, May). Free water eliminated white matter tract integrity of spinal cord in multiple sclerosis and neuromyelitis optica spectrum disorder [Poster]. 2021 Joint annual meeting ISMRM & ISMRT. External link
Vallotton, K., Dávid, G., Hupp, M., Pfender, N., Cohen-Adad, J., Fehlings, M. G., Samson, R. S., Wheeler-Kingshott, C. A. M. G., Curt, A., Freund, P., & Seif, M. (2021). Tracking White and Gray Matter Degeneration along the Spinal Cord Axis in Degenerative Cervical Myelopathy. Journal of Neurotrauma, 38(21), 2978-2987. External link
