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Anctil-Robitaille, B., Théberge, A., Jodoin, P.-M., Descoteaux, M., Desrosiers, C., & Lombaert, H. (2022). Manifold-aware synthesis of high-resolution diffusion from structural imaging. Frontiers in Neuroimaging, 1, 20 pages. Available
Alonso Ortiz, E., Gros, C., Foias, A., Abramovic, M., Ameitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Buchel, C., Budde, M., Callot, V., De Leener, B., Descoteaux, M., De Sousa, P. L., Dostal, M., Doyon, J., Dvorak, A., ... Cohen-Adad, J. (2020, August). Quantitative MRI of the spinal cord : reproducibility and normative values across 40 sites [Paper]. ISMRM & SMRT annual Meeting & Exhibition (ISMRM 2020). External link
Campbell, J. S. W., Baete, S. H., Cohen-Adad, J., Tournier, J.-D., Szczepankiewicz, F., Beaulieu, C., Baron, C. A., Mani, M., Setsompop, K., Liao, C., Tardif, C., Vos, S. B., Yendiki, A., Leppert, I. R., Fieremans, E., de Luca, A., Leemans, A., & Pike, G. B. (2025). Diffusion MRI acquisition for tractography: Beyond the in vivo adult human brain. In Dell'Acqua, F., Descoteaux, M., & Leemans, A. (eds.), Handbook of Diffusion MR Tractography (pp. 143-149). External link
Campbell, J. S. W., Baete, S. H., Cohen-Adad, J., Tournier, J.-D., Szczepankiewicz, F., Beaulieu, C., Baron, C. A., Mani, M., Setsompop, K., Liao, C., Tardif, C., Vos, S. B., Yendiki, A., Leppert, I. R., Fieremans, E., & Pike, G. B. (2025). Diffusion MRI acquisition for tractography: Diffusion encoding. In Dell'Acqua, F., Descoteaux, M., & Leemans, A. (eds.), Handbook of Diffusion MR Tractography (pp. 103-121). External link
Campbell, J. S. W., Baete, S. H., Cohen-Adad, J., Tournier, J.-D., Szczepankiewicz, F., Beaulieu, C., Baron, C. A., Mani, M., Setsompop, K., Liao, C., Tardif, C., Vos, S. B., Yendiki, A., Leppert, I. R., Fieremans, E., & Pike, G. B. (2025). Diffusion MRI acquisition for tractography: Diffusion sequences. In Dell'Acqua, F., Descoteaux, M., & Leemans, A. (eds.), Handbook of Diffusion MR Tractography (pp. 123-141). External link
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Generic acquisition protocol for quantitative MRI of the spinal cord. Nature Protocols, 16(10), 4611-4632. Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., Sousa, P. L. , Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 251 (2 pages). Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021). Scientific Data, 8(1), 242 (1 page). Available
Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M., Callot, V., Combes, A. J. E., De Leener, B., Descoteaux, M., de Sousa, P. L., Dostál, M., Doyon, J., Dvorak, A., ... Xu, J. (2021). Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 219 (17 pages). Available
Cohen-Adad, J., Descoteaux, M., & Wald, L. L. (2011). Quality assessment of high angular resolution diffusion imaging data using bootstrap on Q-ball reconstruction. JMRI, 33(5), 1194-1208. External link
Cohen-Adad, J., Descoteaux, M., Rossignol, S., Hoge, R. D., Deriche, R., & Benali, H. (2008, May). Detection of multiple pathways in the spinal cord white matter using q-ball imaging [Paper]. 5th IEEE International Symposium on Biomedical Imaging : From Nano to Macro, Paris, France. External link
Jelescu, I., Grussu, F., Ianuş, A., Hansen, B. B., Barrett, R., Aggarwal, M., Michielse, S., Nasrallah, F. A., Syeda, W., Wang, N., Veraart, J., Roebroeck, A., Bagdasarian, A. F., Eichner, C., Sepehrband, F., Zimmermann, J., Soustelle, L., Bowman, C., Tendler, B. C., ... Schilling, K. G. (2025). Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging. [Discussion or Letter]. Magnetic Resonance in Medicine, 28 pages. Available
Karakuzu, A., Blostein, N., Caron, A. V., Boré, A., Rheault, F., Descoteaux, M., & Stikov, N. (2025). Rethinking MRI as a measurement device through modular and portable pipelines. Magma (New York, N.Y.), 17 pages. External link
Labounek, R., Bondy, M. T., Paulson, A., Bédard, S., Abramovic, M., Alonso-Ortiz, E., Atcheson, N., Barlow, L., Barry, R., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A., De Leener, B., Descoteaux, M., Sousa, P. L. , Dostál, M., ... Nestrašil, I. (2025). Body size and intracranial volume interact with the structure of the central nervous system: A multi-center in vivo neuroimaging study. Imaging Neuroscience, 38 pages. External link
Labounek, R., Bondy, M. T., Paulson, A. L., Bédard, S., Abramovic, M., Alonso Ortiz, E., Atcheson, N. T., Barlow, L. R., Barry, R. L., Barth, M., Battiston, M., Büchel, C., Budde, M. D., Callot, V., Combes, A., De Leener, B., Descoteaux, M., Loureiro de Sousa, P., Dostál, M., ... Nestrašil, I. (2024). Body size interacts with the structure of the central nervous system: A multi-center in vivo neuroimaging study. bioRxiv, 32 pages. Available
Lefebvre, J., Delafontaine-Martel, P., Lemieux, P., Descoteaux, M., Petit, L., & Lesage, F. (2021, March). Localization and imaging of white matter fiber crossings in whole mouse brains using diffusion MRI and serial blockface OCT [Paper]. Optical Techniques in Neurosurgery, Neurophotonics, and Optogenetics 2021 (8 pages). External link
Lefebvre, J., Delafontaine-Martel, P., Pouliot, P., Girouard, H., Descoteaux, M., & Lesage, F. (2018). Fully automated dual-resolution serial optical coherence tomography aimed at diffusion MRI validation in whole mouse brains. Neurophotonics, 5(4), 045004 (16 pages). Available
Lefebvre, J., Castonguay, A., Pouliot, P., Descoteaux, M., & Lesage, F. (2017). Whole mouse brain imaging using optical coherence tomography: reconstruction, normalization, segmentation, and comparison with diffusion MRI. Neurophotonics, 4(4), 041501 (14 pages). External link
Schilling, K. G., Grussu, F., Ianuş, A., Hansen, B. B., Howard, A., Barrett, R., Aggarwal, M., Michielse, S., Nasrallah, F. A., Syeda, W., Wang, N., Veraart, J., Roebroeck, A., Bagdasarian, A. F., Eichner, C., Sepehrband, F., Zimmermann, J., Soustelle, L., Bowman, C., ... Jelescu, I. (2025). Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 2-Ex vivo imaging: Added value and acquisition. PubMed, 93(6), 2535-2560. External link
Schilling, K. G., Howard, A., Grussu, F., Ianuş, A., Hansen, B. B., Barrett, R., Aggarwal, M., Michielse, S., Nasrallah, F. A., Syeda, W., Wang, N., Veraart, J., Roebroeck, A., Bagdasarian, A. F., Eichner, C., Sepehrband, F., Zimmermann, J., Soustelle, L., Bowman, C., ... Jelescu, I. (2025). Considerations and recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI: Part 3-Ex vivo imaging: Data processing, comparisons with microscopy, and tractography. Magnetic Resonance in Medicine, 22 pages. Available
Sharman, M. A., Cohen-Adad, J., Descoteaux, M., Messé, A., Benali, H., & Lehericy, S. (2011). Impact of outliers on diffusion tensor and Q-ball imaging: Clinical implications and correction strategies. JRMI, 33(6), 1491-1502. External link
