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Castonguay, A., Lefebvre, J., Pouliot, P., & Lesage, F. (2018). Comparing three-dimensional serial optical coherence tomography histology to MRI imaging in the entire mouse brain. Journal of Biomedical Optics, 23(1), 9 pages. External link
Delafontaine-Martel, P., Lefebvre, J., Damseh, R., Castonguay, A., Tardif, P.-L., & Lesage, F. (2018, January). Large scale serial two-photon microscopy to investigate local vascular changes in whole rodent brain models of Alzheimer's disease [Paper]. Multiphoton Microscopy in the Biomedical Sciences XVIII, San Francisco, CA, United states. External link
Delafontaine-Martel, P., Lefebvre, J., Tardif, P.-L., Lévy, B. I., Pouliot, P., & Lesage, F. (2018). Whole brain vascular imaging in a mouse model of Alzheimer's disease with two-photon microscopy. Journal of Biomedical Optics, 23(7), 10 pages. External link
Desjardins, M., Berti, R., Lefebvre, J., Dubeau, S., & Lesage, F. (2014, April). Microscopic Dynamics of Cerebral Capillary Blood Flow in Aged Anesthetized Rats [Paper]. Biomedical Optics 2014, Miami, Florida United States. External link
Gagnon, L., Sakadžić, S., Lesage, F., Musacchia, J. J., Lefebvre, J., Fang, Q., Yücel, M. A., Evans, K., Mandeville, E. T., Cohen-Adad, J., Polimeni, J. R., Yaseen, M. A., Lo, E. H., Greve, D. N., Buxton, R. B., Dale, A. M., Devor, A., & Boas, D. A. (2015). Quantifying the Microvascular Origin of BOLD-fMRI from First Principles with Two-Photon Microscopy and an Oxygen-Sensitive Nanoprobe. Journal of Neuroscience, 35(8), 3663-3675. External link
Gagnon, L., Sakadžić, S., Lesage, F., Musacchia, J. J., Lefebvre, J., Fang, Q., Yücel, M. A., Evans, K. C., Mandeville, E. T., Cohen-Adad, J., Polimeni, J.̈. R., Yaseen, M. A., Lo, E. H., Greve, D. N., Buxton, R. B., Dale, A. M., Devor, A., & Boas, D. A. (2014, April). Underpinning the microvascular origin of BOLD-fMRI with two-photon microscopy [Paper]. Biomedical Optics 2014, Miami, FL, USA. External link
Irgolitsch, F., Huppé-Marcoux, F., Lesage, F., & Lefebvre, J. (2024, January). Slice to volume registration using neural networks for serial optical coherence tomography of whole mouse brains [Paper]. 2024 Computational Optical Imaging and Artificial Intelligence in Biomedical Sciences, San Francisco, CA, USA (9 pages). External link
Lefebvre, J., Pragassam, A., Reynaud, J., Irgolitsch, F., & Lesage, F. (2024, January). Multiorientation mapping of white matter fiber microstructures in whole mouse brains using serial optical coherence tomography [Paper]. 2024 Neural Imaging and Sensing, San Francisco, CA, USA (9 pages). External link
Lefebvre, J., Delafontaine-Martel, P., Lemieux, P., Descoteaux, M., Petit, L., & Lesage, F. (2021, March). Localization and imaging of white matter fiber crossings in whole mouse brains using diffusion MRI and serial blockface OCT [Paper]. Optical Techniques in Neurosurgery, Neurophotonics, and Optogenetics 2021 (8 pages). External link
Lefebvre, J., Delafontaine-Martel, P., & Lesage, F. (2019). A review of intrinsic optical imaging serial blockface histology (ICI-SBH) for whole rodent brain imaging. Photonics, 6(2), 66 (27 pages). Available
Lefebvre, J., Delafontaine-Martel, P., Pouliot, P., Girouard, H., Descoteaux, M., & Lesage, F. (2018). Fully automated dual-resolution serial optical coherence tomography aimed at diffusion MRI validation in whole mouse brains. Neurophotonics, 5(4), 045004 (16 pages). Available
Lefebvre, J. (2018). Neuro-imagerie multimodale et multirésolution de cerveaux de souris combinant l'histologie sérielle par tomographie en cohérence optique et l'IRM de diffusion [Ph.D. thesis, École Polytechnique de Montréal]. Available
Lefebvre, J., Castonguay, A., & Lesage, F. (2018, February). Imaging whole mouse brains with a dual resolution serial swept-source optical coherence tomography scanner [Paper]. SPIE BiOS, San Francisco, California, USA (9 pages). External link
Lefebvre, J., Delafontaine-Martel, P., Castonguay, A., & Lesage, F. (2017, November). Automated serial blockface histology : acquisition, reconstruction and application [Poster]. Big Brain Workshop, Montréal, Québec. External link
Lefebvre, J., Castonguay, A., & Lesage, F. (2017, January). White matter segmentation by estimating tissue optical attenuation from volumetric OCT massive histology of whole rodent brains [Paper]. Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XXIV, USA (9 pages). External link
Lefebvre, J. (2014). Développement d'outils de vectorisation d'angiographies obtenues par microscopie 2-photons dans le contexte du vieillissement du cerveau [Master's thesis, École Polytechnique de Montréal]. Available
Sakadžić, S., Mandeville, E. T., Gagnon, L., Musacchia, J. J., Yaseen, M. A., Yücel, M. A., Lefebvre, J., Lesage, F., Dale, A. M., Eikermann-Haerter, K., Ayata, C., Srinivasan, V. J., Lo, E. H., Devor, A., & Boas, D. A. (2014, June). High-resolution optical microscopy imaging of cortical oxygen delivery and consumption [Paper]. 2014 Conference on Lasers and Electro-Optics, CLEO 2014 - Laser Science to Photonic Applications, San Jose, California, USA (3 pages). External link
Tardif, P.-L., Bertrand, M.-J., Abran, M., Castonguay, A., Lefebvre, J., Stähli, B. E., Merlet, N., Mihalache-Avram, T., Geoffroy, P., Mecteau, M., Busseuil, D., Ni, F., Abulrob, A., Rhéaume, É., L’Allier, P., Tardif, J.-C., & Lesage, F. (2016). Validating intravascular imaging with serial optical coherence tomography and confocal fluorescence microscopy. International Journal of Molecular Sciences, 17(12), 1-12. Available
