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Boudreau, M., Karakuzu, A., Cohen-Adad, J., Bozkurt, E., Carr, M., Castellaro, M., Concha, L., Doneva, M., Dual, S. A., Ensworth, A., Foias, A., Fortier, V., Gabr, R. E., Gilbert, G., Glide-Hurst, C. K., Grech-Sollars, M., Hu, S., Jalnefjord, O., Jovicich, J., ... Stikov, N. (2024). Paper is not enough: Crowdsourcing the T₁ mapping common ground via the ISMRM reproducibility challenge [Dataset]. External link
Boudreau, M., Karakuzu, A., Cohen-Adad, J., Bozkurt, E., Carr, M., Castellaro, M., Concha, L., Doneva, M., Dual, S. A., Ensworth, A., Foias, A., Fortier, V., Gabr, R. E., Gilbert, G., Glide-Hurst, C. K., Grech-Sollars, M., Hu, S., Jalnefjord, O., Jovicich, J., ... ISMRM Quantitative MR Study Group, T. (2024). Repeat it without me: Crowdsourcing the T1 mapping common ground via the ISMRM reproducibility challenge. Magnetic Resonance in Medicine, 30111 (13 pages). External link
Boudreau, M., Karakuzu, A., Boré, A., Zelenkovski, K., Pinsard, B., Alonso Ortiz, E., Boyle, J., Bellec, P., & Cohen-Adad, J. (2023, June). Longitudinal stability of brain and spinal cord quantitative MRI measures [Presentation]. In ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Boudreau, M., Karakuzu, A., Boré, A., Pinsard, B., Zelenkovski, K., Alonso-Ortiz, E., Boyle, J., Bellec, P., & Cohen-Adad, J. (2023). Longitudinal stability of brain and spinal cord quantitative MRI measures [Dataset]. External link
Boudreau, M., Karakuzu, A., Boré, A., Zelenkovski, K., Pinsard, B., Alonso Ortiz, E., Boyle, J., Bellec, P., & Cohen-Adad, J. (2023, June). Longitudinal stability of brain and spinal cord structural quantitative MRI measures [Poster]. ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Boudreau, M., Karakuzu, A., Cohen-Adad, J., Carr, M., Doneva, M., Dual, S. A., Ennis, D. B., Ensworth, A., Foias, A., Fortier, V., Gilbert, G., Grech-Sollars, M., Holloway, L., Hu, S., Jalnefjord, O., Koken, P., Kolokotronis, A., Kukran, S., Lee, N., ... Stikov, N. (2023, June). Phantom results of the ISMRM Joint RRSG-qMRSG reproducibility challenge on T1 mapping [Paper]. ISMRM & ISMRT annual Meeting & Exhibition, Toronto, ON, Canada. External link
Boudreau, M., Karakuzu, A., Cohen-Adad, J., Bozkurt, E., Carr, M., Castellaro, M., Concha, L., Doneva, M., Dual, S., Ensworth, A., Foias, A., Fortier, V., Gabr, R. E., Gilbert, G., Glide-Hurst, C. K., Grech-Sollars, M., Hu, S., Jalnefjord, O., Jovicich, J., ... Stikov, N. (2023). Results of the ISMRM 2020 joint Reproducible Research & Quantitative MR study groups reproducibility challenge on phantom and human brain T₁ mapping [Dataset]. External link
Boudreau, M., Stikov, N., & Jezzard, P. (2022). On the open-source landscape of magnetic resonance in medicine. Magnetic Resonance in Medicine, 88(4), 1495-1497. External link
Boudreau, M., Poline, J.-B., Bellec, P., & Stikov, N. (2021). On the open-source landscape of PLOS Computational Biology. PLOS Computational Biology, 17(2), 3 pages. Available
Boudreau, M., Keenan, K. E., & Stikov, N. (2020). Quantitative T1 and T1ρ Mapping. In Seiberlich, N., Gulani, V., Calamante, F., Campbell-Washburn, A., Doneva, M., Hu, H. H., & Sourbron, S. (eds.), Advances in Magnetic Resonance Technology and Applications (Vol. 1, pp. 19-45). External link
Boudreau, M., Stikov, N., & Pike, G. B. (2018). B-1-sensitivity analysis of quantitative magnetization transfer imaging. Magnetic Resonance in Medicine, 79(1), 276-285. External link
Boudreau, M., Tardif, C. L., Stikov, N., Sled, J. G., Lee, W., & Pike, G. B. (2017). B-1 Mapping for Bias-Correction in Quantitative T-1 Imaging of the Brain at 3T Using Standard Pulse Sequences. Journal of Magnetic Resonance Imaging, 46(6), 1673-1682. External link
Campbell, J. S. W., Leppert, I. R., Narayanan, S., Boudreau, M., Duval, T., Cohen-Adad, J., Pike, G. B., & Stikov, N. (2016, August). Promise and pitfalls of g-ratio estimation with MRI [Paper]. Workshop on Toward a Super-BigBrain - Promise and Pitfalls of Microstructural Imaging, Montréal, Canada. Published in Neuroimage, 182. External link
Campbell, J. S. W., Leppert, I. R., Boudreau, M., Narayanan, S., Cohen-Adad, J., Pike, G. B., & Stikov, N. (2016, May). Mapping the myelin g-ratio: promises and pitfalls. [Paper]. 24th Annual Meeting of ISMRM, Singapore. External link
Cabana, J.-F., Gu, Y., Boudreau, M., Levesque, I. R., Atchia, Y., Sled, J. G., Narayanan, S., Arnold, D. L., Pike, B. G., Cohen-Adad, J., Duval, T., Vuong, M.-T., & Stikov, N. (2016, May). Quantitative Magnetization Transfer Imaging Made Easy with qMTLab: Software for Data Simulation, Analysis and Visualisation. [Paper]. 24th Annual Meeting of ISMRM, Singapore. External link
Cabana, J.-F., Ye, G., Boudreau, M., Levesque, I. R., Atchia, Y., Sled, J. G., Narayanan, S., Arnold, D. L., Pike, G. B., Cohen-Adad, J., Duval, T., Manh-Tung, V., & Stikov, N. (2015). Quantitative magnetization transfer imaging made easy with qMTLab: software for data simulation, analysis, and visualization. Concepts in Magnetic Resonance, Part A (Bridging Education and Research), 44A(5), 263-277. External link
Duval, T., Leppert, I. R., Cabana, J.-F., Boudreau, M., Gagnon, I., Berestovoy, G., Cohen-Adad, J., & Stikov, N. (2018, June). Quantitative MRI made easy with qMRLab [Poster]. Joint annual meeting ISMRM - ESMRMB, Paris, France. External link
Karakuzu, A., Boudreau, M., & Stikov, N. (2024). Reproducible Research Practices in Magnetic Resonance Neuroimaging: A Review Informed by Advanced Language Models. Magnetic Resonance in Medical Sciences, 0174 (16 pages). External link
Karakuzu, A., Appelhoff, S., Auer, T., Boudreau, M., Feingold, F., Khan, A. R., Lazari, A., Markiewicz, C., Mulder, M., Phillips, C., Salo, T., Stikov, N., Whitaker, K., & Hollander, G. (2022). qMRI-BIDS: An extension to the brain imaging data structure for quantitative magnetic resonance imaging data. Scientific Data, 9(1), 517 (9 pages). External link
Karakuzu, A., Hollander, G., Appelhof, S., Auer, T., Boudreau, M., Feingold, F., Khan, A. R., Lazari, A., Phillips, C., Stikov, N., & Whitaker, K. (2020, August). A joint-community effort to standardize quantitative MRI data : update from the BIDS extension proposal [Presentation]. In 2020 Joint annual meeting ISMRM & ISMRT. External link
Karakuzu, A., Boudreau, M., Duval, T., Boshkovski, T., Leppert, I., Cabana, J.-F., Gagnon, I., Beliveau, P., Pike, G. B., Cohen-Adad, J., & Stikov, N. (2020). qMRLab: Quantitative MRI analysis, under one umbrella. Journal of Open Source Software, 5(53), 2343 (4 pages). Available
Karakuzu, A., Boudreau, M., Cohen-Adad, J., & Stikov, N. (2020, August). Thinking outside the black box: A fully transparent T1 mapping pipeline [Poster]. 2020 Joint annual meeting ISMRM & ISMRT. External link
Lousada, E., Boudreau, M., Cohen-Adad, J., Oumesmar, B. N., Burguiere, E., & Schreiweis, C. (2021). Reduced Axon Calibre in the Associative Striatum of the Sapap3 Knockout Mouse. Brain Sciences, 11(10), 1353 (16 pages). External link
Papp, D., Gilbert, K. M., Cereza, G., D'Astous, A., Lopez-Rios, N., Boudreau, M., Couch, M. J., Yazdanbakhsh, P., Barry, R. L., Alonso Ortiz, E., & Cohen-Adad, J. (2024). RF shimming in the cervical spinal cord at 7T. Magnetic Resonance in Medicine, 30225 (12 pages). Available
Poldrack, R. A., Markiewicz, C. J., Appelhoff, S., Ashar, Y. K., Auer, T., Baillet, S., Bansal, S., Beltrachini, L., Benar, C. G., Bertazzoli, G., Bhogawar, S., Blair, R. W., Bortoletto, M., Boudreau, M., Brooks, T. L., Calhoun, V. D., Castelli, F. M., Clement, P., Cohen, A. L., ... Gorgolewski, K. J. (2024). The past, present, and future of the brain imaging data structure (BIDS). Imaging Neuroscience, 2, 00103 (19 pages). External link
Stikov, N., Campbell, J. S. W., Stroh, T., Lavelée, M., Frey, S., Novek, J., Nuara, S., Ho, M.-K., Bedell, B. J., Dougherty, R. F., Leppert, I. R., Boudreau, M., Narayanan, S., Duval, T., Cohen-Adad, J., Picard, P.-A., Gasecka, A., Côté, D., & Pike, G. B. (2015). In vivo histology of the myelin g-ratio with magnetic resonance imaging. NeuroImage, 118, 397-405. External link
Stikov, N., Boudreau, M., Levesque, I. R., Tardif, C. L., Barral, J. K., & Pike, G. B. (2015). On the accuracy of T1 mapping: Searching for common ground. Magnetic Resonance in Medicine, 73(2), 514-522. External link
Stikov, N., Campbell, J. S. W., Stroh, T., Lavelee, M., Frey, S., Novek, J., Nuara, S., Ho, M.-K., Bedell, B. J., Dougherty, R. F., Leppert, I. R., Boudreau, M., Narayanan, S., Duval, T., Cohen-Adad, J., Picard, P.-A., Gasecka, A., Cote, D., & Pike, G. B. (2015). Quantitative analysis of the myelin g-ratio from electron microscopy images of the macaque corpus callosum. Data Brief, 4, 368-373. Available
Wong, A. L., Hricz, N., Malapati, H., von Guionneau, N., Wong, M., Harris, T., Boudreau, M., Cohen-Adad, J., & Tuffaha, S. (2021). A simple and robust method for automating analysis of naïve and regenerating peripheral nerves. PLOS One, 16(7), 14 pages. Available
